Gene : Thecc1EG034403 T. cacao v1.1

Defline:  (1 of 1) PTHR17985//PTHR17985:SF13 - SER/THR-RICH PROTEIN T10 IN DGCR REGION // SUBFAMILY NOT NAMED Genomic Order:  592
Name:  ? Thecc1EG034403 Secondary Identifier:  ? PAC:27459153

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034403 0.5kb upstream 0.5kb upstream 1843 true scaffold_8: 2817622-2819464 Theobroma cacao
Thecc1EG034403 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2817622-2818121 Theobroma cacao
Thecc1EG034403 0.5kb downstream 0.5kb downstream 1843 true scaffold_8: 2818122-2819964 Theobroma cacao
Thecc1EG034403 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2819465-2819964 Theobroma cacao
Thecc1EG034403 1.0kb upstream 1.0kb upstream 2343 true scaffold_8: 2817122-2819464 Theobroma cacao
Thecc1EG034403 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2817122-2818121 Theobroma cacao
Thecc1EG034403 1.0kb downstream 1.0kb downstream 2343 true scaffold_8: 2818122-2820464 Theobroma cacao
Thecc1EG034403 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2819465-2820464 Theobroma cacao
Thecc1EG034403 2.0kb upstream 2.0kb upstream 3343 true scaffold_8: 2816122-2819464 Theobroma cacao
Thecc1EG034403 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2816122-2818121 Theobroma cacao
Thecc1EG034403 2.0kb downstream 2.0kb downstream 3343 true scaffold_8: 2818122-2821464 Theobroma cacao
Thecc1EG034403 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2819465-2821464 Theobroma cacao
Thecc1EG034403 5.0kb upstream 5.0kb upstream 6343 true scaffold_8: 2813122-2819464 Theobroma cacao
Thecc1EG034403 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2813122-2818121 Theobroma cacao
Thecc1EG034403 5.0kb downstream 5.0kb downstream 6343 true scaffold_8: 2818122-2824464 Theobroma cacao
Thecc1EG034403 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2819465-2824464 Theobroma cacao
Thecc1EG034403 10.0kb upstream 10.0kb upstream 11343 true scaffold_8: 2808122-2819464 Theobroma cacao
Thecc1EG034403 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2808122-2818121 Theobroma cacao
Thecc1EG034403 10.0kb downstream 10.0kb downstream 11343 true scaffold_8: 2818122-2829464 Theobroma cacao
Thecc1EG034403 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2819465-2829464 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836292 5264 Brassicales-Malvales View MSA
124347731 5266 SBM View MSA
124236992 5268 Malvidae View MSA
124064404 5270 Rosid View MSA
123753497 5271 Pentapetalae View MSA
122790502 5272 Eudicot View MSA
122045802 5273 Angiosperm View MSA
121346368 5274 Embryophyte View MSA
123428335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain