Gene : Thecc1EG031879 T. cacao v1.1

Defline:  (1 of 2) K08202 - MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5 (SLC22A4_5, OCTN) Genomic Order:  1091
Name:  ? Thecc1EG031879 Secondary Identifier:  ? PAC:27445905

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031879 0.5kb upstream 0.5kb upstream 2302 true scaffold_7: 7588109-7590410 Theobroma cacao
Thecc1EG031879 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7588109-7588608 Theobroma cacao
Thecc1EG031879 0.5kb downstream 0.5kb downstream 2302 true scaffold_7: 7588609-7590910 Theobroma cacao
Thecc1EG031879 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7590411-7590910 Theobroma cacao
Thecc1EG031879 1.0kb upstream 1.0kb upstream 2802 true scaffold_7: 7587609-7590410 Theobroma cacao
Thecc1EG031879 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7587609-7588608 Theobroma cacao
Thecc1EG031879 1.0kb downstream 1.0kb downstream 2802 true scaffold_7: 7588609-7591410 Theobroma cacao
Thecc1EG031879 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7590411-7591410 Theobroma cacao
Thecc1EG031879 2.0kb upstream 2.0kb upstream 3802 true scaffold_7: 7586609-7590410 Theobroma cacao
Thecc1EG031879 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7586609-7588608 Theobroma cacao
Thecc1EG031879 2.0kb downstream 2.0kb downstream 3802 true scaffold_7: 7588609-7592410 Theobroma cacao
Thecc1EG031879 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7590411-7592410 Theobroma cacao
Thecc1EG031879 5.0kb upstream 5.0kb upstream 6802 true scaffold_7: 7583609-7590410 Theobroma cacao
Thecc1EG031879 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7583609-7588608 Theobroma cacao
Thecc1EG031879 5.0kb downstream 5.0kb downstream 6802 true scaffold_7: 7588609-7595410 Theobroma cacao
Thecc1EG031879 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7590411-7595410 Theobroma cacao
Thecc1EG031879 10.0kb upstream 10.0kb upstream 11802 true scaffold_7: 7578609-7590410 Theobroma cacao
Thecc1EG031879 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7578609-7588608 Theobroma cacao
Thecc1EG031879 10.0kb downstream 10.0kb downstream 11802 true scaffold_7: 7588609-7600410 Theobroma cacao
Thecc1EG031879 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7590411-7600410 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122032019 5273 Angiosperm View MSA
123821768 5264 Brassicales-Malvales Singleton cluster - no MSA
124317931 5266 SBM Singleton cluster - no MSA
124166619 5268 Malvidae Singleton cluster - no MSA
123890196 5270 Rosid Singleton cluster - no MSA
123472541 5271 Pentapetalae Singleton cluster - no MSA
122507827 5272 Eudicot Singleton cluster - no MSA
121300966 5274 Embryophyte View MSA
123338666 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain