Gene : Thecc1EG031597 T. cacao v1.1

Defline:  Uncharacterized protein (51%P) Genomic Order:  885
Name:  ? Thecc1EG031597 Secondary Identifier:  ? PAC:27444556

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031597 0.5kb upstream 0.5kb upstream 1356 true scaffold_7: 5784889-5786244 Theobroma cacao
Thecc1EG031597 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5784889-5785388 Theobroma cacao
Thecc1EG031597 0.5kb downstream 0.5kb downstream 1356 true scaffold_7: 5785389-5786744 Theobroma cacao
Thecc1EG031597 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5786245-5786744 Theobroma cacao
Thecc1EG031597 1.0kb upstream 1.0kb upstream 1856 true scaffold_7: 5784389-5786244 Theobroma cacao
Thecc1EG031597 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5784389-5785388 Theobroma cacao
Thecc1EG031597 1.0kb downstream 1.0kb downstream 1856 true scaffold_7: 5785389-5787244 Theobroma cacao
Thecc1EG031597 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5786245-5787244 Theobroma cacao
Thecc1EG031597 2.0kb upstream 2.0kb upstream 2856 true scaffold_7: 5783389-5786244 Theobroma cacao
Thecc1EG031597 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5783389-5785388 Theobroma cacao
Thecc1EG031597 2.0kb downstream 2.0kb downstream 2856 true scaffold_7: 5785389-5788244 Theobroma cacao
Thecc1EG031597 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5786245-5788244 Theobroma cacao
Thecc1EG031597 5.0kb upstream 5.0kb upstream 5856 true scaffold_7: 5780389-5786244 Theobroma cacao
Thecc1EG031597 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5780389-5785388 Theobroma cacao
Thecc1EG031597 5.0kb downstream 5.0kb downstream 5856 true scaffold_7: 5785389-5791244 Theobroma cacao
Thecc1EG031597 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5786245-5791244 Theobroma cacao
Thecc1EG031597 10.0kb upstream 10.0kb upstream 10856 true scaffold_7: 5775389-5786244 Theobroma cacao
Thecc1EG031597 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5775389-5785388 Theobroma cacao
Thecc1EG031597 10.0kb downstream 10.0kb downstream 10856 true scaffold_7: 5785389-5796244 Theobroma cacao
Thecc1EG031597 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5786245-5796244 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830976 5264 Brassicales-Malvales View MSA
124350540 5266 SBM View MSA
124244851 5268 Malvidae View MSA
124065326 5270 Rosid View MSA
123736904 5271 Pentapetalae View MSA
122790031 5272 Eudicot View MSA
122046322 5273 Angiosperm View MSA
121310588 5274 Embryophyte View MSA
123348035 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain