Gene : Thecc1EG030511 T. cacao v1.1
Defline:  (1 of 3) PTHR13711//PTHR13711:SF202 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN // HIGH MOBILITY GROUP B PROTEIN 10-RELATED Genomic Order:  14
Name:  ? Thecc1EG030511 Secondary Identifier:  ? PAC:27446368
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030511 0.5kb upstream 0.5kb upstream 3898 true scaffold_7: 88434-92331 Theobroma cacao
Thecc1EG030511 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 91832-92331 Theobroma cacao
Thecc1EG030511 0.5kb downstream 0.5kb downstream 3898 true scaffold_7: 87934-91831 Theobroma cacao
Thecc1EG030511 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 87934-88433 Theobroma cacao
Thecc1EG030511 1.0kb upstream 1.0kb upstream 4398 true scaffold_7: 88434-92831 Theobroma cacao
Thecc1EG030511 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 91832-92831 Theobroma cacao
Thecc1EG030511 1.0kb downstream 1.0kb downstream 4398 true scaffold_7: 87434-91831 Theobroma cacao
Thecc1EG030511 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 87434-88433 Theobroma cacao
Thecc1EG030511 2.0kb upstream 2.0kb upstream 5398 true scaffold_7: 88434-93831 Theobroma cacao
Thecc1EG030511 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 91832-93831 Theobroma cacao
Thecc1EG030511 2.0kb downstream 2.0kb downstream 5398 true scaffold_7: 86434-91831 Theobroma cacao
Thecc1EG030511 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 86434-88433 Theobroma cacao
Thecc1EG030511 5.0kb upstream 5.0kb upstream 8398 true scaffold_7: 88434-96831 Theobroma cacao
Thecc1EG030511 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 91832-96831 Theobroma cacao
Thecc1EG030511 5.0kb downstream 5.0kb downstream 8398 true scaffold_7: 83434-91831 Theobroma cacao
Thecc1EG030511 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 83434-88433 Theobroma cacao
Thecc1EG030511 10.0kb upstream 10.0kb upstream 13398 true scaffold_7: 88434-101831 Theobroma cacao
Thecc1EG030511 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 91832-101831 Theobroma cacao
Thecc1EG030511 10.0kb downstream 10.0kb downstream 13398 true scaffold_7: 78434-91831 Theobroma cacao
Thecc1EG030511 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 78434-88433 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831186 5264 Brassicales-Malvales View MSA
124340597 5266 SBM View MSA
124240999 5268 Malvidae View MSA
124066815 5270 Rosid View MSA
123749147 5271 Pentapetalae View MSA
122792446 5272 Eudicot View MSA
122048952 5273 Angiosperm View MSA
121343849 5274 Embryophyte View MSA
123424352 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain