Gene : Thecc1EG030586 T. cacao v1.1
Defline:  (1 of 2) PTHR21716 - TRANSMEMBRANE PROTEIN Genomic Order:  81
Name:  ? Thecc1EG030586 Secondary Identifier:  ? PAC:27445881
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030586 0.5kb upstream 0.5kb upstream 3997 true scaffold_7: 425113-429109 Theobroma cacao
Thecc1EG030586 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 428610-429109 Theobroma cacao
Thecc1EG030586 0.5kb downstream 0.5kb downstream 3997 true scaffold_7: 424613-428609 Theobroma cacao
Thecc1EG030586 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 424613-425112 Theobroma cacao
Thecc1EG030586 1.0kb upstream 1.0kb upstream 4497 true scaffold_7: 425113-429609 Theobroma cacao
Thecc1EG030586 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 428610-429609 Theobroma cacao
Thecc1EG030586 1.0kb downstream 1.0kb downstream 4497 true scaffold_7: 424113-428609 Theobroma cacao
Thecc1EG030586 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 424113-425112 Theobroma cacao
Thecc1EG030586 2.0kb upstream 2.0kb upstream 5497 true scaffold_7: 425113-430609 Theobroma cacao
Thecc1EG030586 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 428610-430609 Theobroma cacao
Thecc1EG030586 2.0kb downstream 2.0kb downstream 5497 true scaffold_7: 423113-428609 Theobroma cacao
Thecc1EG030586 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 423113-425112 Theobroma cacao
Thecc1EG030586 5.0kb upstream 5.0kb upstream 8497 true scaffold_7: 425113-433609 Theobroma cacao
Thecc1EG030586 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 428610-433609 Theobroma cacao
Thecc1EG030586 5.0kb downstream 5.0kb downstream 8497 true scaffold_7: 420113-428609 Theobroma cacao
Thecc1EG030586 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 420113-425112 Theobroma cacao
Thecc1EG030586 10.0kb upstream 10.0kb upstream 13497 true scaffold_7: 425113-438609 Theobroma cacao
Thecc1EG030586 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 428610-438609 Theobroma cacao
Thecc1EG030586 10.0kb downstream 10.0kb downstream 13497 true scaffold_7: 415113-428609 Theobroma cacao
Thecc1EG030586 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 415113-425112 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829339 5264 Brassicales-Malvales View MSA
124341716 5266 SBM View MSA
124239051 5268 Malvidae View MSA
124073302 5270 Rosid View MSA
123750556 5271 Pentapetalae View MSA
122792038 5272 Eudicot View MSA
122049890 5273 Angiosperm View MSA
121348658 5274 Embryophyte View MSA
123426031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain