Gene : Thecc1EG029974 T. cacao v1.1
Defline:  (1 of 1) K12184 - ESCRT-I complex subunit VPS28 (VPS28) Genomic Order:  1924
Name:  ? Thecc1EG029974 Secondary Identifier:  ? PAC:27440434
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029974 0.5kb upstream 0.5kb upstream 3342 true scaffold_6: 25232375-25235716 Theobroma cacao
Thecc1EG029974 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 25232375-25232874 Theobroma cacao
Thecc1EG029974 0.5kb downstream 0.5kb downstream 3342 true scaffold_6: 25232875-25236216 Theobroma cacao
Thecc1EG029974 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 25235717-25236216 Theobroma cacao
Thecc1EG029974 1.0kb upstream 1.0kb upstream 3842 true scaffold_6: 25231875-25235716 Theobroma cacao
Thecc1EG029974 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 25231875-25232874 Theobroma cacao
Thecc1EG029974 1.0kb downstream 1.0kb downstream 3842 true scaffold_6: 25232875-25236716 Theobroma cacao
Thecc1EG029974 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 25235717-25236716 Theobroma cacao
Thecc1EG029974 2.0kb upstream 2.0kb upstream 4842 true scaffold_6: 25230875-25235716 Theobroma cacao
Thecc1EG029974 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 25230875-25232874 Theobroma cacao
Thecc1EG029974 2.0kb downstream 2.0kb downstream 4842 true scaffold_6: 25232875-25237716 Theobroma cacao
Thecc1EG029974 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 25235717-25237716 Theobroma cacao
Thecc1EG029974 5.0kb upstream 5.0kb upstream 7842 true scaffold_6: 25227875-25235716 Theobroma cacao
Thecc1EG029974 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 25227875-25232874 Theobroma cacao
Thecc1EG029974 5.0kb downstream 5.0kb downstream 7842 true scaffold_6: 25232875-25240716 Theobroma cacao
Thecc1EG029974 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 25235717-25240716 Theobroma cacao
Thecc1EG029974 10.0kb upstream 10.0kb upstream 12842 true scaffold_6: 25222875-25235716 Theobroma cacao
Thecc1EG029974 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 25222875-25232874 Theobroma cacao
Thecc1EG029974 10.0kb downstream 10.0kb downstream 12842 true scaffold_6: 25232875-25245716 Theobroma cacao
Thecc1EG029974 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 25235717-25245716 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123821237 5264 Brassicales-Malvales Singleton cluster - no MSA
124317424 5266 SBM Singleton cluster - no MSA
124166156 5268 Malvidae Singleton cluster - no MSA
123889776 5270 Rosid Singleton cluster - no MSA
123751452 5271 Pentapetalae View MSA
122791006 5272 Eudicot View MSA
122044389 5273 Angiosperm View MSA
121350792 5274 Embryophyte View MSA
123425897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain