Gene : Pavir.1NG010700 P. virgatum v4.1
Defline:  (1 of 2) KOG3623 - Homeobox transcription factor SIP1 Genomic Order:  101
Name:  ? Pavir.1NG010700 Secondary Identifier:  ? PAC:37611666
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG010700 0.5kb upstream 0.5kb upstream 5903 true Chr01N: 1297819-1303721 Panicum virgatum
Pavir.1NG010700 0.5kb upstream 0.5kb upstream 500 false Chr01N: 1303222-1303721 Panicum virgatum
Pavir.1NG010700 0.5kb downstream 0.5kb downstream 5903 true Chr01N: 1297319-1303221 Panicum virgatum
Pavir.1NG010700 0.5kb downstream 0.5kb downstream 500 false Chr01N: 1297319-1297818 Panicum virgatum
Pavir.1NG010700 1.0kb upstream 1.0kb upstream 6403 true Chr01N: 1297819-1304221 Panicum virgatum
Pavir.1NG010700 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 1303222-1304221 Panicum virgatum
Pavir.1NG010700 1.0kb downstream 1.0kb downstream 6403 true Chr01N: 1296819-1303221 Panicum virgatum
Pavir.1NG010700 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 1296819-1297818 Panicum virgatum
Pavir.1NG010700 2.0kb upstream 2.0kb upstream 7403 true Chr01N: 1297819-1305221 Panicum virgatum
Pavir.1NG010700 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 1303222-1305221 Panicum virgatum
Pavir.1NG010700 2.0kb downstream 2.0kb downstream 7403 true Chr01N: 1295819-1303221 Panicum virgatum
Pavir.1NG010700 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 1295819-1297818 Panicum virgatum
Pavir.1NG010700 5.0kb upstream 5.0kb upstream 10403 true Chr01N: 1297819-1308221 Panicum virgatum
Pavir.1NG010700 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 1303222-1308221 Panicum virgatum
Pavir.1NG010700 5.0kb downstream 5.0kb downstream 10403 true Chr01N: 1292819-1303221 Panicum virgatum
Pavir.1NG010700 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 1292819-1297818 Panicum virgatum
Pavir.1NG010700 10.0kb upstream 10.0kb upstream 15403 true Chr01N: 1297819-1313221 Panicum virgatum
Pavir.1NG010700 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 1303222-1313221 Panicum virgatum
Pavir.1NG010700 10.0kb downstream 10.0kb downstream 15403 true Chr01N: 1287819-1303221 Panicum virgatum
Pavir.1NG010700 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 1287819-1297818 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029261 5273 Angiosperm View MSA
122194805 5267 Panicoideae View MSA
124581000 5269 Grass View MSA
121298616 5274 Embryophyte View MSA
123336578 5275 Viridiplantae View MSA

0 Rna Seq Expressions

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