Gene : Thecc1EG029076 T. cacao v1.1
Defline:  (1 of 1) KOG0327//KOG0328 - Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases // Predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily Genomic Order:  1146
Name:  ? Thecc1EG029076 Secondary Identifier:  ? PAC:27438708
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029076 0.5kb upstream 0.5kb upstream 4315 true scaffold_6: 20472865-20477179 Theobroma cacao
Thecc1EG029076 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 20476680-20477179 Theobroma cacao
Thecc1EG029076 0.5kb downstream 0.5kb downstream 4315 true scaffold_6: 20472365-20476679 Theobroma cacao
Thecc1EG029076 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 20472365-20472864 Theobroma cacao
Thecc1EG029076 1.0kb upstream 1.0kb upstream 4815 true scaffold_6: 20472865-20477679 Theobroma cacao
Thecc1EG029076 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 20476680-20477679 Theobroma cacao
Thecc1EG029076 1.0kb downstream 1.0kb downstream 4815 true scaffold_6: 20471865-20476679 Theobroma cacao
Thecc1EG029076 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 20471865-20472864 Theobroma cacao
Thecc1EG029076 2.0kb upstream 2.0kb upstream 5815 true scaffold_6: 20472865-20478679 Theobroma cacao
Thecc1EG029076 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 20476680-20478679 Theobroma cacao
Thecc1EG029076 2.0kb downstream 2.0kb downstream 5815 true scaffold_6: 20470865-20476679 Theobroma cacao
Thecc1EG029076 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 20470865-20472864 Theobroma cacao
Thecc1EG029076 5.0kb upstream 5.0kb upstream 8815 true scaffold_6: 20472865-20481679 Theobroma cacao
Thecc1EG029076 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 20476680-20481679 Theobroma cacao
Thecc1EG029076 5.0kb downstream 5.0kb downstream 8815 true scaffold_6: 20467865-20476679 Theobroma cacao
Thecc1EG029076 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 20467865-20472864 Theobroma cacao
Thecc1EG029076 10.0kb upstream 10.0kb upstream 13815 true scaffold_6: 20472865-20486679 Theobroma cacao
Thecc1EG029076 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 20476680-20486679 Theobroma cacao
Thecc1EG029076 10.0kb downstream 10.0kb downstream 13815 true scaffold_6: 20462865-20476679 Theobroma cacao
Thecc1EG029076 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 20462865-20472864 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838192 5264 Brassicales-Malvales View MSA
124346371 5266 SBM View MSA
124251046 5268 Malvidae View MSA
124071119 5270 Rosid View MSA
123753006 5271 Pentapetalae View MSA
122788239 5272 Eudicot View MSA
122046690 5273 Angiosperm View MSA
121345295 5274 Embryophyte View MSA
123427522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain