Gene : Thecc1EG028887 T. cacao v1.1
Defline:  (1 of 2) PTHR13832//PTHR13832:SF357 - PROTEIN PHOSPHATASE 2C // SUBFAMILY NOT NAMED Genomic Order:  994
Name:  ? Thecc1EG028887 Secondary Identifier:  ? PAC:27438426
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028887 0.5kb upstream 0.5kb upstream 23893 true scaffold_6: 19167636-19191528 Theobroma cacao
Thecc1EG028887 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 19167636-19168135 Theobroma cacao
Thecc1EG028887 0.5kb downstream 0.5kb downstream 23893 true scaffold_6: 19168136-19192028 Theobroma cacao
Thecc1EG028887 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 19191529-19192028 Theobroma cacao
Thecc1EG028887 1.0kb upstream 1.0kb upstream 24393 true scaffold_6: 19167136-19191528 Theobroma cacao
Thecc1EG028887 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 19167136-19168135 Theobroma cacao
Thecc1EG028887 1.0kb downstream 1.0kb downstream 24393 true scaffold_6: 19168136-19192528 Theobroma cacao
Thecc1EG028887 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 19191529-19192528 Theobroma cacao
Thecc1EG028887 2.0kb upstream 2.0kb upstream 25393 true scaffold_6: 19166136-19191528 Theobroma cacao
Thecc1EG028887 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 19166136-19168135 Theobroma cacao
Thecc1EG028887 2.0kb downstream 2.0kb downstream 25393 true scaffold_6: 19168136-19193528 Theobroma cacao
Thecc1EG028887 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 19191529-19193528 Theobroma cacao
Thecc1EG028887 5.0kb upstream 5.0kb upstream 28393 true scaffold_6: 19163136-19191528 Theobroma cacao
Thecc1EG028887 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 19163136-19168135 Theobroma cacao
Thecc1EG028887 5.0kb downstream 5.0kb downstream 28393 true scaffold_6: 19168136-19196528 Theobroma cacao
Thecc1EG028887 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 19191529-19196528 Theobroma cacao
Thecc1EG028887 10.0kb upstream 10.0kb upstream 33393 true scaffold_6: 19158136-19191528 Theobroma cacao
Thecc1EG028887 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 19158136-19168135 Theobroma cacao
Thecc1EG028887 10.0kb downstream 10.0kb downstream 33393 true scaffold_6: 19168136-19201528 Theobroma cacao
Thecc1EG028887 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 19191529-19201528 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121673261 5273 Angiosperm View MSA
123842289 5264 Brassicales-Malvales View MSA
124323375 5266 SBM View MSA
124255942 5268 Malvidae View MSA
124074271 5270 Rosid View MSA
123628536 5271 Pentapetalae View MSA
122662803 5272 Eudicot View MSA
123428982 5275 Viridiplantae View MSA
121349461 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain