Gene : Thecc1EG028908 T. cacao v1.1
Defline:  (1 of 2) PTHR33172:SF2 - EMB|CAB83157.1 Genomic Order:  1011
Name:  ? Thecc1EG028908 Secondary Identifier:  ? PAC:27441060
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028908 0.5kb upstream 0.5kb upstream 1722 true scaffold_6: 19348881-19350602 Theobroma cacao
Thecc1EG028908 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 19350103-19350602 Theobroma cacao
Thecc1EG028908 0.5kb downstream 0.5kb downstream 1722 true scaffold_6: 19348381-19350102 Theobroma cacao
Thecc1EG028908 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 19348381-19348880 Theobroma cacao
Thecc1EG028908 1.0kb upstream 1.0kb upstream 2222 true scaffold_6: 19348881-19351102 Theobroma cacao
Thecc1EG028908 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 19350103-19351102 Theobroma cacao
Thecc1EG028908 1.0kb downstream 1.0kb downstream 2222 true scaffold_6: 19347881-19350102 Theobroma cacao
Thecc1EG028908 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 19347881-19348880 Theobroma cacao
Thecc1EG028908 2.0kb upstream 2.0kb upstream 3222 true scaffold_6: 19348881-19352102 Theobroma cacao
Thecc1EG028908 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 19350103-19352102 Theobroma cacao
Thecc1EG028908 2.0kb downstream 2.0kb downstream 3222 true scaffold_6: 19346881-19350102 Theobroma cacao
Thecc1EG028908 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 19346881-19348880 Theobroma cacao
Thecc1EG028908 5.0kb upstream 5.0kb upstream 6222 true scaffold_6: 19348881-19355102 Theobroma cacao
Thecc1EG028908 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 19350103-19355102 Theobroma cacao
Thecc1EG028908 5.0kb downstream 5.0kb downstream 6222 true scaffold_6: 19343881-19350102 Theobroma cacao
Thecc1EG028908 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 19343881-19348880 Theobroma cacao
Thecc1EG028908 10.0kb upstream 10.0kb upstream 11222 true scaffold_6: 19348881-19360102 Theobroma cacao
Thecc1EG028908 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 19350103-19360102 Theobroma cacao
Thecc1EG028908 10.0kb downstream 10.0kb downstream 11222 true scaffold_6: 19338881-19350102 Theobroma cacao
Thecc1EG028908 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 19338881-19348880 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826784 5264 Brassicales-Malvales View MSA
124349556 5266 SBM View MSA
124245865 5268 Malvidae View MSA
124074077 5270 Rosid View MSA
123750402 5271 Pentapetalae View MSA
122795824 5272 Eudicot View MSA
122046186 5273 Angiosperm View MSA
121310570 5274 Embryophyte View MSA
123348021 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain