Gene : Thecc1EG027312 T. cacao v1.1
Defline:  (1 of 2) K14972 - PAX-interacting protein 1 (PAXIP1, PTIP) Genomic Order:  329
Name:  ? Thecc1EG027312 Secondary Identifier:  ? PAC:27439727
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027312 0.5kb upstream 0.5kb upstream 13870 true scaffold_6: 2904370-2918239 Theobroma cacao
Thecc1EG027312 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2917740-2918239 Theobroma cacao
Thecc1EG027312 0.5kb downstream 0.5kb downstream 13870 true scaffold_6: 2903870-2917739 Theobroma cacao
Thecc1EG027312 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2903870-2904369 Theobroma cacao
Thecc1EG027312 1.0kb upstream 1.0kb upstream 14370 true scaffold_6: 2904370-2918739 Theobroma cacao
Thecc1EG027312 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2917740-2918739 Theobroma cacao
Thecc1EG027312 1.0kb downstream 1.0kb downstream 14370 true scaffold_6: 2903370-2917739 Theobroma cacao
Thecc1EG027312 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2903370-2904369 Theobroma cacao
Thecc1EG027312 2.0kb upstream 2.0kb upstream 15370 true scaffold_6: 2904370-2919739 Theobroma cacao
Thecc1EG027312 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2917740-2919739 Theobroma cacao
Thecc1EG027312 2.0kb downstream 2.0kb downstream 15370 true scaffold_6: 2902370-2917739 Theobroma cacao
Thecc1EG027312 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2902370-2904369 Theobroma cacao
Thecc1EG027312 5.0kb upstream 5.0kb upstream 18370 true scaffold_6: 2904370-2922739 Theobroma cacao
Thecc1EG027312 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2917740-2922739 Theobroma cacao
Thecc1EG027312 5.0kb downstream 5.0kb downstream 18370 true scaffold_6: 2899370-2917739 Theobroma cacao
Thecc1EG027312 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2899370-2904369 Theobroma cacao
Thecc1EG027312 10.0kb upstream 10.0kb upstream 23370 true scaffold_6: 2904370-2927739 Theobroma cacao
Thecc1EG027312 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2917740-2927739 Theobroma cacao
Thecc1EG027312 10.0kb downstream 10.0kb downstream 23370 true scaffold_6: 2894370-2917739 Theobroma cacao
Thecc1EG027312 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2894370-2904369 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828111 5264 Brassicales-Malvales View MSA
124342709 5266 SBM View MSA
124244540 5268 Malvidae View MSA
124073988 5270 Rosid View MSA
123752539 5271 Pentapetalae View MSA
122797451 5272 Eudicot View MSA
122048270 5273 Angiosperm View MSA
121350628 5274 Embryophyte View MSA
123381823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain