Gene : Thecc1EG024835 T. cacao v1.1
Defline:  (1 of 1) 6.3.2.9 - UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase / Uridine diphospho-N-acetylmuramoylalanyl-D-glutamate synthetase Genomic Order:  1673
Name:  ? Thecc1EG024835 Secondary Identifier:  ? PAC:27421706
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024835 0.5kb upstream 0.5kb upstream 14934 true scaffold_5: 29009377-29024310 Theobroma cacao
Thecc1EG024835 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 29009377-29009876 Theobroma cacao
Thecc1EG024835 0.5kb downstream 0.5kb downstream 14934 true scaffold_5: 29009877-29024810 Theobroma cacao
Thecc1EG024835 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 29024311-29024810 Theobroma cacao
Thecc1EG024835 1.0kb upstream 1.0kb upstream 15434 true scaffold_5: 29008877-29024310 Theobroma cacao
Thecc1EG024835 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 29008877-29009876 Theobroma cacao
Thecc1EG024835 1.0kb downstream 1.0kb downstream 15434 true scaffold_5: 29009877-29025310 Theobroma cacao
Thecc1EG024835 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 29024311-29025310 Theobroma cacao
Thecc1EG024835 2.0kb upstream 2.0kb upstream 16434 true scaffold_5: 29007877-29024310 Theobroma cacao
Thecc1EG024835 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 29007877-29009876 Theobroma cacao
Thecc1EG024835 2.0kb downstream 2.0kb downstream 16434 true scaffold_5: 29009877-29026310 Theobroma cacao
Thecc1EG024835 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 29024311-29026310 Theobroma cacao
Thecc1EG024835 5.0kb upstream 5.0kb upstream 19434 true scaffold_5: 29004877-29024310 Theobroma cacao
Thecc1EG024835 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 29004877-29009876 Theobroma cacao
Thecc1EG024835 5.0kb downstream 5.0kb downstream 19434 true scaffold_5: 29009877-29029310 Theobroma cacao
Thecc1EG024835 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 29024311-29029310 Theobroma cacao
Thecc1EG024835 10.0kb upstream 10.0kb upstream 24434 true scaffold_5: 28999877-29024310 Theobroma cacao
Thecc1EG024835 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 28999877-29009876 Theobroma cacao
Thecc1EG024835 10.0kb downstream 10.0kb downstream 24434 true scaffold_5: 29009877-29034310 Theobroma cacao
Thecc1EG024835 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 29024311-29034310 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791923 5273 Angiosperm View MSA
123826650 5264 Brassicales-Malvales View MSA
124348871 5266 SBM View MSA
124180991 5268 Malvidae View MSA
124072772 5270 Rosid View MSA
123745817 5271 Pentapetalae View MSA
122795344 5272 Eudicot View MSA
121348459 5274 Embryophyte View MSA
123380872 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain