Gene : Thecc1EG022842 T. cacao v1.1
Defline:  (1 of 1) PTHR24067//PTHR24067:SF117 - UBIQUITIN-CONJUGATING ENZYME E2 // UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1D Genomic Order:  982
Name:  ? Thecc1EG022842 Secondary Identifier:  ? PAC:27423048
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022842 0.5kb upstream 0.5kb upstream 4511 true scaffold_5: 8020559-8025069 Theobroma cacao
Thecc1EG022842 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8020559-8021058 Theobroma cacao
Thecc1EG022842 0.5kb downstream 0.5kb downstream 4511 true scaffold_5: 8021059-8025569 Theobroma cacao
Thecc1EG022842 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8025070-8025569 Theobroma cacao
Thecc1EG022842 1.0kb upstream 1.0kb upstream 5011 true scaffold_5: 8020059-8025069 Theobroma cacao
Thecc1EG022842 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8020059-8021058 Theobroma cacao
Thecc1EG022842 1.0kb downstream 1.0kb downstream 5011 true scaffold_5: 8021059-8026069 Theobroma cacao
Thecc1EG022842 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8025070-8026069 Theobroma cacao
Thecc1EG022842 2.0kb upstream 2.0kb upstream 6011 true scaffold_5: 8019059-8025069 Theobroma cacao
Thecc1EG022842 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8019059-8021058 Theobroma cacao
Thecc1EG022842 2.0kb downstream 2.0kb downstream 6011 true scaffold_5: 8021059-8027069 Theobroma cacao
Thecc1EG022842 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8025070-8027069 Theobroma cacao
Thecc1EG022842 5.0kb upstream 5.0kb upstream 9011 true scaffold_5: 8016059-8025069 Theobroma cacao
Thecc1EG022842 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8016059-8021058 Theobroma cacao
Thecc1EG022842 5.0kb downstream 5.0kb downstream 9011 true scaffold_5: 8021059-8030069 Theobroma cacao
Thecc1EG022842 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8025070-8030069 Theobroma cacao
Thecc1EG022842 10.0kb upstream 10.0kb upstream 14011 true scaffold_5: 8011059-8025069 Theobroma cacao
Thecc1EG022842 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8011059-8021058 Theobroma cacao
Thecc1EG022842 10.0kb downstream 10.0kb downstream 14011 true scaffold_5: 8021059-8035069 Theobroma cacao
Thecc1EG022842 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8025070-8035069 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828789 5264 Brassicales-Malvales View MSA
124338488 5266 SBM View MSA
124240521 5268 Malvidae View MSA
124065657 5270 Rosid View MSA
123750389 5271 Pentapetalae View MSA
122794390 5272 Eudicot View MSA
122043594 5273 Angiosperm View MSA
121349017 5274 Embryophyte View MSA
123425410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain