Gene : Thecc1EG016976 T. cacao v1.1

Defline:  (1 of 1) KOG2365 - Uncharacterized membrane protein Genomic Order:  181
Name:  ? Thecc1EG016976 Secondary Identifier:  ? PAC:27455964

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016976 0.5kb upstream 0.5kb upstream 3923 true scaffold_4: 1192448-1196370 Theobroma cacao
Thecc1EG016976 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 1192448-1192947 Theobroma cacao
Thecc1EG016976 0.5kb downstream 0.5kb downstream 3923 true scaffold_4: 1192948-1196870 Theobroma cacao
Thecc1EG016976 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 1196371-1196870 Theobroma cacao
Thecc1EG016976 1.0kb upstream 1.0kb upstream 4423 true scaffold_4: 1191948-1196370 Theobroma cacao
Thecc1EG016976 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 1191948-1192947 Theobroma cacao
Thecc1EG016976 1.0kb downstream 1.0kb downstream 4423 true scaffold_4: 1192948-1197370 Theobroma cacao
Thecc1EG016976 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 1196371-1197370 Theobroma cacao
Thecc1EG016976 2.0kb upstream 2.0kb upstream 5423 true scaffold_4: 1190948-1196370 Theobroma cacao
Thecc1EG016976 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 1190948-1192947 Theobroma cacao
Thecc1EG016976 2.0kb downstream 2.0kb downstream 5423 true scaffold_4: 1192948-1198370 Theobroma cacao
Thecc1EG016976 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 1196371-1198370 Theobroma cacao
Thecc1EG016976 5.0kb upstream 5.0kb upstream 8423 true scaffold_4: 1187948-1196370 Theobroma cacao
Thecc1EG016976 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 1187948-1192947 Theobroma cacao
Thecc1EG016976 5.0kb downstream 5.0kb downstream 8423 true scaffold_4: 1192948-1201370 Theobroma cacao
Thecc1EG016976 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 1196371-1201370 Theobroma cacao
Thecc1EG016976 10.0kb upstream 10.0kb upstream 13423 true scaffold_4: 1182948-1196370 Theobroma cacao
Thecc1EG016976 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 1182948-1192947 Theobroma cacao
Thecc1EG016976 10.0kb downstream 10.0kb downstream 13423 true scaffold_4: 1192948-1206370 Theobroma cacao
Thecc1EG016976 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 1196371-1206370 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691271 5273 Angiosperm View MSA
123841753 5264 Brassicales-Malvales View MSA
124323005 5266 SBM View MSA
124255401 5268 Malvidae View MSA
123953157 5270 Rosid View MSA
123647115 5271 Pentapetalae View MSA
122681119 5272 Eudicot View MSA
121348658 5274 Embryophyte View MSA
123426031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain