Gene : Thecc1EG015116 T. cacao v1.1
Defline:  (1 of 1) PTHR24128:SF13 - E3 UBIQUITIN-PROTEIN LIGASE XBAT33 Genomic Order:  1740
Name:  ? Thecc1EG015116 Secondary Identifier:  ? PAC:27450167
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG015116 0.5kb upstream 0.5kb upstream 6121 true scaffold_3: 26293412-26299532 Theobroma cacao
Thecc1EG015116 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 26293412-26293911 Theobroma cacao
Thecc1EG015116 0.5kb downstream 0.5kb downstream 6121 true scaffold_3: 26293912-26300032 Theobroma cacao
Thecc1EG015116 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 26299533-26300032 Theobroma cacao
Thecc1EG015116 1.0kb upstream 1.0kb upstream 6621 true scaffold_3: 26292912-26299532 Theobroma cacao
Thecc1EG015116 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 26292912-26293911 Theobroma cacao
Thecc1EG015116 1.0kb downstream 1.0kb downstream 6621 true scaffold_3: 26293912-26300532 Theobroma cacao
Thecc1EG015116 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 26299533-26300532 Theobroma cacao
Thecc1EG015116 2.0kb upstream 2.0kb upstream 7621 true scaffold_3: 26291912-26299532 Theobroma cacao
Thecc1EG015116 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 26291912-26293911 Theobroma cacao
Thecc1EG015116 2.0kb downstream 2.0kb downstream 7621 true scaffold_3: 26293912-26301532 Theobroma cacao
Thecc1EG015116 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 26299533-26301532 Theobroma cacao
Thecc1EG015116 5.0kb upstream 5.0kb upstream 10621 true scaffold_3: 26288912-26299532 Theobroma cacao
Thecc1EG015116 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 26288912-26293911 Theobroma cacao
Thecc1EG015116 5.0kb downstream 5.0kb downstream 10621 true scaffold_3: 26293912-26304532 Theobroma cacao
Thecc1EG015116 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 26299533-26304532 Theobroma cacao
Thecc1EG015116 10.0kb upstream 10.0kb upstream 15621 true scaffold_3: 26283912-26299532 Theobroma cacao
Thecc1EG015116 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 26283912-26293911 Theobroma cacao
Thecc1EG015116 10.0kb downstream 10.0kb downstream 15621 true scaffold_3: 26293912-26309532 Theobroma cacao
Thecc1EG015116 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 26299533-26309532 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828156 5264 Brassicales-Malvales View MSA
124337064 5266 SBM View MSA
124237091 5268 Malvidae View MSA
124061674 5270 Rosid View MSA
123746531 5271 Pentapetalae View MSA
122792004 5272 Eudicot View MSA
122042206 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348775 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain