Gene : Thecc1EG047000 T. cacao v1.1
Defline:  (1 of 1) PTHR21528:SF0 - NOGO-B RECEPTOR Genomic Order:  1190
Name:  ? Thecc1EG047000 Secondary Identifier:  ? PAC:27464882
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6129 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG047000 0.5kb upstream 0.5kb upstream 4343 true scaffold_2: 6284029-6288371 Theobroma cacao
Thecc1EG047000 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 6284029-6284528 Theobroma cacao
Thecc1EG047000 0.5kb downstream 0.5kb downstream 4343 true scaffold_2: 6284529-6288871 Theobroma cacao
Thecc1EG047000 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 6288372-6288871 Theobroma cacao
Thecc1EG047000 1.0kb upstream 1.0kb upstream 4843 true scaffold_2: 6283529-6288371 Theobroma cacao
Thecc1EG047000 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 6283529-6284528 Theobroma cacao
Thecc1EG047000 1.0kb downstream 1.0kb downstream 4843 true scaffold_2: 6284529-6289371 Theobroma cacao
Thecc1EG047000 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 6288372-6289371 Theobroma cacao
Thecc1EG047000 2.0kb upstream 2.0kb upstream 5843 true scaffold_2: 6282529-6288371 Theobroma cacao
Thecc1EG047000 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 6282529-6284528 Theobroma cacao
Thecc1EG047000 2.0kb downstream 2.0kb downstream 5843 true scaffold_2: 6284529-6290371 Theobroma cacao
Thecc1EG047000 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 6288372-6290371 Theobroma cacao
Thecc1EG047000 5.0kb upstream 5.0kb upstream 8843 true scaffold_2: 6279529-6288371 Theobroma cacao
Thecc1EG047000 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 6279529-6284528 Theobroma cacao
Thecc1EG047000 5.0kb downstream 5.0kb downstream 8843 true scaffold_2: 6284529-6293371 Theobroma cacao
Thecc1EG047000 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 6288372-6293371 Theobroma cacao
Thecc1EG047000 10.0kb upstream 10.0kb upstream 13843 true scaffold_2: 6274529-6288371 Theobroma cacao
Thecc1EG047000 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 6274529-6284528 Theobroma cacao
Thecc1EG047000 10.0kb downstream 10.0kb downstream 13843 true scaffold_2: 6284529-6298371 Theobroma cacao
Thecc1EG047000 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 6288372-6298371 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840405 5264 Brassicales-Malvales View MSA
124342513 5266 SBM View MSA
124238686 5268 Malvidae View MSA
124061993 5270 Rosid View MSA
123744162 5271 Pentapetalae View MSA
122791831 5272 Eudicot View MSA
122045568 5273 Angiosperm View MSA
121310466 5274 Embryophyte View MSA
123347940 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain