Gene : Thecc1EG011326 T. cacao v1.1
Defline:  (1 of 1) K01637 - isocitrate lyase (E4.1.3.1, aceA) Genomic Order:  3124
Name:  ? Thecc1EG011326 Secondary Identifier:  ? PAC:27460504
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLYOXYLATE-BYPASS Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011326 0.5kb upstream 0.5kb upstream 7255 true scaffold_2: 39440974-39448228 Theobroma cacao
Thecc1EG011326 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 39447729-39448228 Theobroma cacao
Thecc1EG011326 0.5kb downstream 0.5kb downstream 7255 true scaffold_2: 39440474-39447728 Theobroma cacao
Thecc1EG011326 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 39440474-39440973 Theobroma cacao
Thecc1EG011326 1.0kb upstream 1.0kb upstream 7755 true scaffold_2: 39440974-39448728 Theobroma cacao
Thecc1EG011326 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 39447729-39448728 Theobroma cacao
Thecc1EG011326 1.0kb downstream 1.0kb downstream 7755 true scaffold_2: 39439974-39447728 Theobroma cacao
Thecc1EG011326 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 39439974-39440973 Theobroma cacao
Thecc1EG011326 2.0kb upstream 2.0kb upstream 8755 true scaffold_2: 39440974-39449728 Theobroma cacao
Thecc1EG011326 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 39447729-39449728 Theobroma cacao
Thecc1EG011326 2.0kb downstream 2.0kb downstream 8755 true scaffold_2: 39438974-39447728 Theobroma cacao
Thecc1EG011326 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 39438974-39440973 Theobroma cacao
Thecc1EG011326 5.0kb upstream 5.0kb upstream 11755 true scaffold_2: 39440974-39452728 Theobroma cacao
Thecc1EG011326 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 39447729-39452728 Theobroma cacao
Thecc1EG011326 5.0kb downstream 5.0kb downstream 11755 true scaffold_2: 39435974-39447728 Theobroma cacao
Thecc1EG011326 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 39435974-39440973 Theobroma cacao
Thecc1EG011326 10.0kb upstream 10.0kb upstream 16755 true scaffold_2: 39440974-39457728 Theobroma cacao
Thecc1EG011326 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 39447729-39457728 Theobroma cacao
Thecc1EG011326 10.0kb downstream 10.0kb downstream 16755 true scaffold_2: 39430974-39447728 Theobroma cacao
Thecc1EG011326 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 39430974-39440973 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830860 5264 Brassicales-Malvales View MSA
124345344 5266 SBM View MSA
124240855 5268 Malvidae View MSA
124069108 5270 Rosid View MSA
123740253 5271 Pentapetalae View MSA
122791392 5272 Eudicot View MSA
122049985 5273 Angiosperm View MSA
121347561 5274 Embryophyte View MSA
123428552 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain