Gene : Potri.018G087300 P. trichocarpa v3.1

Defline:  (1 of 1) K15463 - tRNA A64-2'-O-ribosylphosphate transferase [EC:2.4.2.-] (RIT1) Genomic Order:  891
Name:  ? Potri.018G087300 Secondary Identifier:  ? PAC:37248525

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.018G087300 0.5kb upstream 0.5kb upstream 5394 true Chr18: 11443550-11448943 Populus trichocarpa
Potri.018G087300 0.5kb upstream 0.5kb upstream 500 false Chr18: 11448444-11448943 Populus trichocarpa
Potri.018G087300 0.5kb downstream 0.5kb downstream 5394 true Chr18: 11443050-11448443 Populus trichocarpa
Potri.018G087300 0.5kb downstream 0.5kb downstream 500 false Chr18: 11443050-11443549 Populus trichocarpa
Potri.018G087300 1.0kb upstream 1.0kb upstream 5894 true Chr18: 11443550-11449443 Populus trichocarpa
Potri.018G087300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 11448444-11449443 Populus trichocarpa
Potri.018G087300 1.0kb downstream 1.0kb downstream 5894 true Chr18: 11442550-11448443 Populus trichocarpa
Potri.018G087300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 11442550-11443549 Populus trichocarpa
Potri.018G087300 2.0kb upstream 2.0kb upstream 6894 true Chr18: 11443550-11450443 Populus trichocarpa
Potri.018G087300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 11448444-11450443 Populus trichocarpa
Potri.018G087300 2.0kb downstream 2.0kb downstream 6894 true Chr18: 11441550-11448443 Populus trichocarpa
Potri.018G087300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 11441550-11443549 Populus trichocarpa
Potri.018G087300 5.0kb upstream 5.0kb upstream 9894 true Chr18: 11443550-11453443 Populus trichocarpa
Potri.018G087300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 11448444-11453443 Populus trichocarpa
Potri.018G087300 5.0kb downstream 5.0kb downstream 9894 true Chr18: 11438550-11448443 Populus trichocarpa
Potri.018G087300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 11438550-11443549 Populus trichocarpa
Potri.018G087300 10.0kb upstream 10.0kb upstream 14894 true Chr18: 11443550-11458443 Populus trichocarpa
Potri.018G087300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 11448444-11458443 Populus trichocarpa
Potri.018G087300 10.0kb downstream 10.0kb downstream 14894 true Chr18: 11433550-11448443 Populus trichocarpa
Potri.018G087300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 11433550-11443549 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459732 5262 Malpighiales View MSA
124241485 5268 Malvidae View MSA
124064987 5270 Rosid View MSA
123736577 5271 Pentapetalae View MSA
122790906 5272 Eudicot View MSA
122043011 5273 Angiosperm View MSA
121346582 5274 Embryophyte View MSA
123424647 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain