Gene : Potri.013G081700 P. trichocarpa v3.1

Defline:  (1 of 8) PF03242 - Late embryogenesis abundant protein (LEA_3) Genomic Order:  834
Name:  ? Potri.013G081700 Secondary Identifier:  ? PAC:37233044

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G081700 0.5kb upstream 0.5kb upstream 3995 true Chr13: 7289587-7293581 Populus trichocarpa
Potri.013G081700 0.5kb upstream 0.5kb upstream 500 false Chr13: 7289587-7290086 Populus trichocarpa
Potri.013G081700 0.5kb downstream 0.5kb downstream 3995 true Chr13: 7290087-7294081 Populus trichocarpa
Potri.013G081700 0.5kb downstream 0.5kb downstream 500 false Chr13: 7293582-7294081 Populus trichocarpa
Potri.013G081700 1.0kb upstream 1.0kb upstream 4495 true Chr13: 7289087-7293581 Populus trichocarpa
Potri.013G081700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 7289087-7290086 Populus trichocarpa
Potri.013G081700 1.0kb downstream 1.0kb downstream 4495 true Chr13: 7290087-7294581 Populus trichocarpa
Potri.013G081700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 7293582-7294581 Populus trichocarpa
Potri.013G081700 2.0kb upstream 2.0kb upstream 5495 true Chr13: 7288087-7293581 Populus trichocarpa
Potri.013G081700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 7288087-7290086 Populus trichocarpa
Potri.013G081700 2.0kb downstream 2.0kb downstream 5495 true Chr13: 7290087-7295581 Populus trichocarpa
Potri.013G081700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 7293582-7295581 Populus trichocarpa
Potri.013G081700 5.0kb upstream 5.0kb upstream 8495 true Chr13: 7285087-7293581 Populus trichocarpa
Potri.013G081700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 7285087-7290086 Populus trichocarpa
Potri.013G081700 5.0kb downstream 5.0kb downstream 8495 true Chr13: 7290087-7298581 Populus trichocarpa
Potri.013G081700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 7293582-7298581 Populus trichocarpa
Potri.013G081700 10.0kb upstream 10.0kb upstream 13495 true Chr13: 7280087-7293581 Populus trichocarpa
Potri.013G081700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 7280087-7290086 Populus trichocarpa
Potri.013G081700 10.0kb downstream 10.0kb downstream 13495 true Chr13: 7290087-7303581 Populus trichocarpa
Potri.013G081700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 7293582-7303581 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448525 5262 Malpighiales View MSA
124237411 5268 Malvidae View MSA
124062865 5270 Rosid View MSA
123741966 5271 Pentapetalae View MSA
122788610 5272 Eudicot View MSA
122042414 5273 Angiosperm View MSA
121309963 5274 Embryophyte View MSA
123347581 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain