Gene : Potri.006G052800 P. trichocarpa v3.1
Defline:  (1 of 12) K06617 - raffinose synthase (E2.4.1.82) Genomic Order:  539
Name:  ? Potri.006G052800 Secondary Identifier:  ? PAC:37244127
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5337 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.006G052800 0.5kb upstream 0.5kb upstream 6209 true Chr06: 3786844-3793052 Populus trichocarpa
Potri.006G052800 0.5kb upstream 0.5kb upstream 500 false Chr06: 3792553-3793052 Populus trichocarpa
Potri.006G052800 0.5kb downstream 0.5kb downstream 6209 true Chr06: 3786344-3792552 Populus trichocarpa
Potri.006G052800 0.5kb downstream 0.5kb downstream 500 false Chr06: 3786344-3786843 Populus trichocarpa
Potri.006G052800 1.0kb upstream 1.0kb upstream 6709 true Chr06: 3786844-3793552 Populus trichocarpa
Potri.006G052800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3792553-3793552 Populus trichocarpa
Potri.006G052800 1.0kb downstream 1.0kb downstream 6709 true Chr06: 3785844-3792552 Populus trichocarpa
Potri.006G052800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3785844-3786843 Populus trichocarpa
Potri.006G052800 2.0kb upstream 2.0kb upstream 7709 true Chr06: 3786844-3794552 Populus trichocarpa
Potri.006G052800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3792553-3794552 Populus trichocarpa
Potri.006G052800 2.0kb downstream 2.0kb downstream 7709 true Chr06: 3784844-3792552 Populus trichocarpa
Potri.006G052800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3784844-3786843 Populus trichocarpa
Potri.006G052800 5.0kb upstream 5.0kb upstream 10709 true Chr06: 3786844-3797552 Populus trichocarpa
Potri.006G052800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3792553-3797552 Populus trichocarpa
Potri.006G052800 5.0kb downstream 5.0kb downstream 10709 true Chr06: 3781844-3792552 Populus trichocarpa
Potri.006G052800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3781844-3786843 Populus trichocarpa
Potri.006G052800 10.0kb upstream 10.0kb upstream 15709 true Chr06: 3786844-3802552 Populus trichocarpa
Potri.006G052800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3792553-3802552 Populus trichocarpa
Potri.006G052800 10.0kb downstream 10.0kb downstream 15709 true Chr06: 3776844-3792552 Populus trichocarpa
Potri.006G052800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3776844-3786843 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122463463 5262 Malpighiales View MSA
124249240 5268 Malvidae View MSA
124064190 5270 Rosid View MSA
123740319 5271 Pentapetalae View MSA
122793686 5272 Eudicot View MSA
122044208 5273 Angiosperm View MSA
123429020 5275 Viridiplantae View MSA
121345613 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain