Gene : Potri.003G221600 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR22594//PTHR22594:SF20 - ASPARTYL/LYSYL-TRNA SYNTHETASE // LYSINE--TRNA LIGASE Genomic Order:  2313
Name:  ? Potri.003G221600 Secondary Identifier:  ? PAC:37235210
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G221600 0.5kb upstream 0.5kb upstream 6591 true Chr03: 21644055-21650645 Populus trichocarpa
Potri.003G221600 0.5kb upstream 0.5kb upstream 500 false Chr03: 21644055-21644554 Populus trichocarpa
Potri.003G221600 0.5kb downstream 0.5kb downstream 6591 true Chr03: 21644555-21651145 Populus trichocarpa
Potri.003G221600 0.5kb downstream 0.5kb downstream 500 false Chr03: 21650646-21651145 Populus trichocarpa
Potri.003G221600 1.0kb upstream 1.0kb upstream 7091 true Chr03: 21643555-21650645 Populus trichocarpa
Potri.003G221600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 21643555-21644554 Populus trichocarpa
Potri.003G221600 1.0kb downstream 1.0kb downstream 7091 true Chr03: 21644555-21651645 Populus trichocarpa
Potri.003G221600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 21650646-21651645 Populus trichocarpa
Potri.003G221600 2.0kb upstream 2.0kb upstream 8091 true Chr03: 21642555-21650645 Populus trichocarpa
Potri.003G221600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 21642555-21644554 Populus trichocarpa
Potri.003G221600 2.0kb downstream 2.0kb downstream 8091 true Chr03: 21644555-21652645 Populus trichocarpa
Potri.003G221600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 21650646-21652645 Populus trichocarpa
Potri.003G221600 5.0kb upstream 5.0kb upstream 11091 true Chr03: 21639555-21650645 Populus trichocarpa
Potri.003G221600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 21639555-21644554 Populus trichocarpa
Potri.003G221600 5.0kb downstream 5.0kb downstream 11091 true Chr03: 21644555-21655645 Populus trichocarpa
Potri.003G221600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 21650646-21655645 Populus trichocarpa
Potri.003G221600 10.0kb upstream 10.0kb upstream 16091 true Chr03: 21634555-21650645 Populus trichocarpa
Potri.003G221600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 21634555-21644554 Populus trichocarpa
Potri.003G221600 10.0kb downstream 10.0kb downstream 16091 true Chr03: 21644555-21660645 Populus trichocarpa
Potri.003G221600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 21650646-21660645 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458438 5262 Malpighiales View MSA
124239048 5268 Malvidae View MSA
124063653 5270 Rosid View MSA
123739204 5271 Pentapetalae View MSA
122788489 5272 Eudicot View MSA
122044302 5273 Angiosperm View MSA
121346599 5274 Embryophyte View MSA
123423817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain