Gene : Potri.003G062700 P. trichocarpa v3.1

Defline:  (1 of 222) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  662
Name:  ? Potri.003G062700 Secondary Identifier:  ? PAC:37236481

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G062700 0.5kb upstream 0.5kb upstream 5586 true Chr03: 9094452-9100037 Populus trichocarpa
Potri.003G062700 0.5kb upstream 0.5kb upstream 500 false Chr03: 9099538-9100037 Populus trichocarpa
Potri.003G062700 0.5kb downstream 0.5kb downstream 5586 true Chr03: 9093952-9099537 Populus trichocarpa
Potri.003G062700 0.5kb downstream 0.5kb downstream 500 false Chr03: 9093952-9094451 Populus trichocarpa
Potri.003G062700 1.0kb upstream 1.0kb upstream 6086 true Chr03: 9094452-9100537 Populus trichocarpa
Potri.003G062700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 9099538-9100537 Populus trichocarpa
Potri.003G062700 1.0kb downstream 1.0kb downstream 6086 true Chr03: 9093452-9099537 Populus trichocarpa
Potri.003G062700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 9093452-9094451 Populus trichocarpa
Potri.003G062700 2.0kb upstream 2.0kb upstream 7086 true Chr03: 9094452-9101537 Populus trichocarpa
Potri.003G062700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 9099538-9101537 Populus trichocarpa
Potri.003G062700 2.0kb downstream 2.0kb downstream 7086 true Chr03: 9092452-9099537 Populus trichocarpa
Potri.003G062700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 9092452-9094451 Populus trichocarpa
Potri.003G062700 5.0kb upstream 5.0kb upstream 10086 true Chr03: 9094452-9104537 Populus trichocarpa
Potri.003G062700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 9099538-9104537 Populus trichocarpa
Potri.003G062700 5.0kb downstream 5.0kb downstream 10086 true Chr03: 9089452-9099537 Populus trichocarpa
Potri.003G062700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 9089452-9094451 Populus trichocarpa
Potri.003G062700 10.0kb upstream 10.0kb upstream 15086 true Chr03: 9094452-9109537 Populus trichocarpa
Potri.003G062700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 9099538-9109537 Populus trichocarpa
Potri.003G062700 10.0kb downstream 10.0kb downstream 15086 true Chr03: 9084452-9099537 Populus trichocarpa
Potri.003G062700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 9084452-9094451 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457502 5262 Malpighiales View MSA
124242471 5268 Malvidae View MSA
124063725 5270 Rosid View MSA
123743446 5271 Pentapetalae View MSA
122788248 5272 Eudicot View MSA
122047755 5273 Angiosperm View MSA
121310787 5274 Embryophyte View MSA
123348188 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain