Gene : Phvul.L009443 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10983:SF26 - 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 3 Genomic Order:  79
Name:  ? Phvul.L009443 Secondary Identifier:  ? PAC:37178895
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-1319 Phaseolus vulgaris pathologic  
Pvulgaris PWY4FS-7 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7411 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7417 Phaseolus vulgaris pathologic  
Pvulgaris TRIGLSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L009443 0.5kb upstream 0.5kb upstream 3983 true scaffold_15: 635714-639696 Phaseolus vulgaris
Phvul.L009443 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 635714-636213 Phaseolus vulgaris
Phvul.L009443 0.5kb downstream 0.5kb downstream 3983 true scaffold_15: 636214-640196 Phaseolus vulgaris
Phvul.L009443 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 639697-640196 Phaseolus vulgaris
Phvul.L009443 1.0kb upstream 1.0kb upstream 4483 true scaffold_15: 635214-639696 Phaseolus vulgaris
Phvul.L009443 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 635214-636213 Phaseolus vulgaris
Phvul.L009443 1.0kb downstream 1.0kb downstream 4483 true scaffold_15: 636214-640696 Phaseolus vulgaris
Phvul.L009443 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 639697-640696 Phaseolus vulgaris
Phvul.L009443 2.0kb upstream 2.0kb upstream 5483 true scaffold_15: 634214-639696 Phaseolus vulgaris
Phvul.L009443 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 634214-636213 Phaseolus vulgaris
Phvul.L009443 2.0kb downstream 2.0kb downstream 5483 true scaffold_15: 636214-641696 Phaseolus vulgaris
Phvul.L009443 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 639697-641696 Phaseolus vulgaris
Phvul.L009443 5.0kb upstream 5.0kb upstream 8483 true scaffold_15: 631214-639696 Phaseolus vulgaris
Phvul.L009443 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 631214-636213 Phaseolus vulgaris
Phvul.L009443 5.0kb downstream 5.0kb downstream 8483 true scaffold_15: 636214-644696 Phaseolus vulgaris
Phvul.L009443 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 639697-644696 Phaseolus vulgaris
Phvul.L009443 10.0kb upstream 10.0kb upstream 13483 true scaffold_15: 626214-639696 Phaseolus vulgaris
Phvul.L009443 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 626214-636213 Phaseolus vulgaris
Phvul.L009443 10.0kb downstream 10.0kb downstream 13483 true scaffold_15: 636214-649696 Phaseolus vulgaris
Phvul.L009443 10.0kb downstream 10.0kb downstream 10000 false scaffold_15: 639697-649696 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028069 5273 Angiosperm View MSA
122300078 5265 Fabidae View MSA
124037222 5270 Rosid View MSA
123753579 5271 Pentapetalae View MSA
122775158 5272 Eudicot View MSA
121297614 5274 Embryophyte View MSA
123335652 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.204153 0.0 0.860213 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0697146 0.0 0.325616 Low  
cufflinks 0.9577 0.0 3.5832   High
cufflinks 0.0732821 0.0 0.3441 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.164951 0.0 0.70709 Low  
cufflinks 0.313697 0.0 1.28178 Low  
cufflinks 0.0426401 0.0 0.210473 Low Low
cufflinks 0.0868406 0.0 0.400091 Low  

0 Strain