Gene : Phvul.008G226700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  2306
Name:  ? Phvul.008G226700 Secondary Identifier:  ? PAC:37157973
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5466 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6824 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G226700 0.5kb upstream 0.5kb upstream 4161 true Chr08: 57694233-57698393 Phaseolus vulgaris
Phvul.008G226700 0.5kb upstream 0.5kb upstream 500 false Chr08: 57697894-57698393 Phaseolus vulgaris
Phvul.008G226700 0.5kb downstream 0.5kb downstream 4161 true Chr08: 57693733-57697893 Phaseolus vulgaris
Phvul.008G226700 0.5kb downstream 0.5kb downstream 500 false Chr08: 57693733-57694232 Phaseolus vulgaris
Phvul.008G226700 1.0kb upstream 1.0kb upstream 4661 true Chr08: 57694233-57698893 Phaseolus vulgaris
Phvul.008G226700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 57697894-57698893 Phaseolus vulgaris
Phvul.008G226700 1.0kb downstream 1.0kb downstream 4661 true Chr08: 57693233-57697893 Phaseolus vulgaris
Phvul.008G226700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 57693233-57694232 Phaseolus vulgaris
Phvul.008G226700 2.0kb upstream 2.0kb upstream 5661 true Chr08: 57694233-57699893 Phaseolus vulgaris
Phvul.008G226700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 57697894-57699893 Phaseolus vulgaris
Phvul.008G226700 2.0kb downstream 2.0kb downstream 5661 true Chr08: 57692233-57697893 Phaseolus vulgaris
Phvul.008G226700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 57692233-57694232 Phaseolus vulgaris
Phvul.008G226700 5.0kb upstream 5.0kb upstream 8661 true Chr08: 57694233-57702893 Phaseolus vulgaris
Phvul.008G226700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 57697894-57702893 Phaseolus vulgaris
Phvul.008G226700 5.0kb downstream 5.0kb downstream 8661 true Chr08: 57689233-57697893 Phaseolus vulgaris
Phvul.008G226700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 57689233-57694232 Phaseolus vulgaris
Phvul.008G226700 10.0kb upstream 10.0kb upstream 13661 true Chr08: 57694233-57707893 Phaseolus vulgaris
Phvul.008G226700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 57697894-57707893 Phaseolus vulgaris
Phvul.008G226700 10.0kb downstream 10.0kb downstream 13661 true Chr08: 57684233-57697893 Phaseolus vulgaris
Phvul.008G226700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 57684233-57694232 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779717 5273 Angiosperm View MSA
122304068 5265 Fabidae View MSA
124070050 5270 Rosid View MSA
123743966 5271 Pentapetalae View MSA
122770838 5272 Eudicot View MSA
121051361 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.214104 0.0 0.840454 Low Low
cufflinks 0.1128 0.0 0.46462 Low Low
cufflinks 0.467287 0.0 1.71372 Low  
cufflinks 0.9829 0.0 3.35731    
cufflinks 24.0779 0.0 62.2445   High
cufflinks 0.504638 0.0 1.84046 Low  
cufflinks 15.1724 0.0 39.5251   High
cufflinks 2.97986 0.0 8.9109    
cufflinks 9.25416 0.0 24.8484    
cufflinks 3.0697 0.0 9.23549    
cufflinks 15.5968 0.0 40.7306   High

0 Strain