Gene : Phvul.008G236700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32227:SF52 - GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 2 Genomic Order:  2380
Name:  ? Phvul.008G236700 Secondary Identifier:  ? PAC:37157709
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G236700 0.5kb upstream 0.5kb upstream 3465 true Chr08: 58523915-58527379 Phaseolus vulgaris
Phvul.008G236700 0.5kb upstream 0.5kb upstream 500 false Chr08: 58523915-58524414 Phaseolus vulgaris
Phvul.008G236700 0.5kb downstream 0.5kb downstream 3465 true Chr08: 58524415-58527879 Phaseolus vulgaris
Phvul.008G236700 0.5kb downstream 0.5kb downstream 500 false Chr08: 58527380-58527879 Phaseolus vulgaris
Phvul.008G236700 1.0kb upstream 1.0kb upstream 3965 true Chr08: 58523415-58527379 Phaseolus vulgaris
Phvul.008G236700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 58523415-58524414 Phaseolus vulgaris
Phvul.008G236700 1.0kb downstream 1.0kb downstream 3965 true Chr08: 58524415-58528379 Phaseolus vulgaris
Phvul.008G236700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 58527380-58528379 Phaseolus vulgaris
Phvul.008G236700 2.0kb upstream 2.0kb upstream 4965 true Chr08: 58522415-58527379 Phaseolus vulgaris
Phvul.008G236700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 58522415-58524414 Phaseolus vulgaris
Phvul.008G236700 2.0kb downstream 2.0kb downstream 4965 true Chr08: 58524415-58529379 Phaseolus vulgaris
Phvul.008G236700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 58527380-58529379 Phaseolus vulgaris
Phvul.008G236700 5.0kb upstream 5.0kb upstream 7965 true Chr08: 58519415-58527379 Phaseolus vulgaris
Phvul.008G236700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 58519415-58524414 Phaseolus vulgaris
Phvul.008G236700 5.0kb downstream 5.0kb downstream 7965 true Chr08: 58524415-58532379 Phaseolus vulgaris
Phvul.008G236700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 58527380-58532379 Phaseolus vulgaris
Phvul.008G236700 10.0kb upstream 10.0kb upstream 12965 true Chr08: 58514415-58527379 Phaseolus vulgaris
Phvul.008G236700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 58514415-58524414 Phaseolus vulgaris
Phvul.008G236700 10.0kb downstream 10.0kb downstream 12965 true Chr08: 58524415-58537379 Phaseolus vulgaris
Phvul.008G236700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 58527380-58537379 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302850 5265 Fabidae View MSA
124063315 5270 Rosid View MSA
123741211 5271 Pentapetalae View MSA
122791300 5272 Eudicot View MSA
122043027 5273 Angiosperm View MSA
121351661 5274 Embryophyte View MSA
123382266 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.35531 0.0 18.207    
cufflinks 16.1029 0.0 46.0061    
cufflinks 2.65532 0.0 8.65144   Low
cufflinks 9.13386 0.0 32.4366    
cufflinks 15.0353 0.0 55.0589    
cufflinks 9.53359 0.0 37.1188    
cufflinks 8.0465 0.0 29.525    
cufflinks 16.3717 0.0 53.245    
cufflinks 8.95048 0.0 31.9281    
cufflinks 1.20066 0.0 4.74191   Low
cufflinks 13.3055 0.0 39.2598    

0 Strain