Gene : Phvul.008G185100 P. vulgaris v2.1
Defline:  (1 of 3) K02492 - glutamyl-tRNA reductase (hemA) Genomic Order:  1862
Name:  ? Phvul.008G185100 Secondary Identifier:  ? PAC:37158039
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5188 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5918 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G185100 0.5kb upstream 0.5kb upstream 4009 true Chr08: 52151085-52155093 Phaseolus vulgaris
Phvul.008G185100 0.5kb upstream 0.5kb upstream 500 false Chr08: 52154594-52155093 Phaseolus vulgaris
Phvul.008G185100 0.5kb downstream 0.5kb downstream 4009 true Chr08: 52150585-52154593 Phaseolus vulgaris
Phvul.008G185100 0.5kb downstream 0.5kb downstream 500 false Chr08: 52150585-52151084 Phaseolus vulgaris
Phvul.008G185100 1.0kb upstream 1.0kb upstream 4509 true Chr08: 52151085-52155593 Phaseolus vulgaris
Phvul.008G185100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 52154594-52155593 Phaseolus vulgaris
Phvul.008G185100 1.0kb downstream 1.0kb downstream 4509 true Chr08: 52150085-52154593 Phaseolus vulgaris
Phvul.008G185100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 52150085-52151084 Phaseolus vulgaris
Phvul.008G185100 2.0kb upstream 2.0kb upstream 5509 true Chr08: 52151085-52156593 Phaseolus vulgaris
Phvul.008G185100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 52154594-52156593 Phaseolus vulgaris
Phvul.008G185100 2.0kb downstream 2.0kb downstream 5509 true Chr08: 52149085-52154593 Phaseolus vulgaris
Phvul.008G185100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 52149085-52151084 Phaseolus vulgaris
Phvul.008G185100 5.0kb upstream 5.0kb upstream 8509 true Chr08: 52151085-52159593 Phaseolus vulgaris
Phvul.008G185100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 52154594-52159593 Phaseolus vulgaris
Phvul.008G185100 5.0kb downstream 5.0kb downstream 8509 true Chr08: 52146085-52154593 Phaseolus vulgaris
Phvul.008G185100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 52146085-52151084 Phaseolus vulgaris
Phvul.008G185100 10.0kb upstream 10.0kb upstream 13509 true Chr08: 52151085-52164593 Phaseolus vulgaris
Phvul.008G185100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 52154594-52164593 Phaseolus vulgaris
Phvul.008G185100 10.0kb downstream 10.0kb downstream 13509 true Chr08: 52141085-52154593 Phaseolus vulgaris
Phvul.008G185100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 52141085-52151084 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308158 5265 Fabidae View MSA
124065838 5270 Rosid View MSA
123737748 5271 Pentapetalae View MSA
122790191 5272 Eudicot View MSA
122042343 5273 Angiosperm View MSA
121344593 5274 Embryophyte View MSA
123424931 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.5301 0.0 45.3551    
cufflinks 50.3406 0.0 135.65 High  
cufflinks 315.74 0.0 1133.09 High High
cufflinks 19.8202 0.0 51.2472    
cufflinks 34.4166 0.0 89.9199 High  
cufflinks 121.837 0.0 363.201 High High
cufflinks 1.84144 0.0 5.71915   Low
cufflinks 19.4902 0.0 50.3794    
cufflinks 0.270886 0.0 1.02465 Low Low
cufflinks 3.40757 0.0 9.91209    
cufflinks 22.9269 0.0 59.2945    

0 Strain