Gene : Phvul.008G012500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31992:SF26 - DOF ZINC FINGER PROTEIN DOF2.4 Genomic Order:  125
Name:  ? Phvul.008G012500 Secondary Identifier:  ? PAC:37161174
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G012500 0.5kb upstream 0.5kb upstream 2313 true Chr08: 1032664-1034976 Phaseolus vulgaris
Phvul.008G012500 0.5kb upstream 0.5kb upstream 500 false Chr08: 1032664-1033163 Phaseolus vulgaris
Phvul.008G012500 0.5kb downstream 0.5kb downstream 2313 true Chr08: 1033164-1035476 Phaseolus vulgaris
Phvul.008G012500 0.5kb downstream 0.5kb downstream 500 false Chr08: 1034977-1035476 Phaseolus vulgaris
Phvul.008G012500 1.0kb upstream 1.0kb upstream 2813 true Chr08: 1032164-1034976 Phaseolus vulgaris
Phvul.008G012500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1032164-1033163 Phaseolus vulgaris
Phvul.008G012500 1.0kb downstream 1.0kb downstream 2813 true Chr08: 1033164-1035976 Phaseolus vulgaris
Phvul.008G012500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1034977-1035976 Phaseolus vulgaris
Phvul.008G012500 2.0kb upstream 2.0kb upstream 3813 true Chr08: 1031164-1034976 Phaseolus vulgaris
Phvul.008G012500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1031164-1033163 Phaseolus vulgaris
Phvul.008G012500 2.0kb downstream 2.0kb downstream 3813 true Chr08: 1033164-1036976 Phaseolus vulgaris
Phvul.008G012500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1034977-1036976 Phaseolus vulgaris
Phvul.008G012500 5.0kb upstream 5.0kb upstream 6813 true Chr08: 1028164-1034976 Phaseolus vulgaris
Phvul.008G012500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1028164-1033163 Phaseolus vulgaris
Phvul.008G012500 5.0kb downstream 5.0kb downstream 6813 true Chr08: 1033164-1039976 Phaseolus vulgaris
Phvul.008G012500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1034977-1039976 Phaseolus vulgaris
Phvul.008G012500 10.0kb upstream 10.0kb upstream 11813 true Chr08: 1023164-1034976 Phaseolus vulgaris
Phvul.008G012500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1023164-1033163 Phaseolus vulgaris
Phvul.008G012500 10.0kb downstream 10.0kb downstream 11813 true Chr08: 1033164-1044976 Phaseolus vulgaris
Phvul.008G012500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1034977-1044976 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312837 5265 Fabidae View MSA
124069853 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.09857 0.0 12.9803    
cufflinks 2.37847 0.0 10.7655    
cufflinks 5.35063 0.0 21.1549   High
cufflinks 3.02313 0.0 9.93012    
cufflinks 3.51212 0.0 14.5446    
cufflinks 7.18065 0.0 24.0641   High
cufflinks 2.35168 0.0 10.2949    
cufflinks 3.24403 0.0 13.3384    
cufflinks 1.21568 0.0 6.4518   Low
cufflinks 1.13988 0.0 6.43051   Low
cufflinks 4.19272 0.0 16.5431    

0 Strain