Gene : Phvul.009G107800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21573:SF0 - ER MEMBRANE PROTEIN COMPLEX SUBUNIT 1 Genomic Order:  1113
Name:  ? Phvul.009G107800 Secondary Identifier:  ? PAC:37151843
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G107800 0.5kb upstream 0.5kb upstream 7974 true Chr09: 16717943-16725916 Phaseolus vulgaris
Phvul.009G107800 0.5kb upstream 0.5kb upstream 500 false Chr09: 16725417-16725916 Phaseolus vulgaris
Phvul.009G107800 0.5kb downstream 0.5kb downstream 7974 true Chr09: 16717443-16725416 Phaseolus vulgaris
Phvul.009G107800 0.5kb downstream 0.5kb downstream 500 false Chr09: 16717443-16717942 Phaseolus vulgaris
Phvul.009G107800 1.0kb upstream 1.0kb upstream 8474 true Chr09: 16717943-16726416 Phaseolus vulgaris
Phvul.009G107800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 16725417-16726416 Phaseolus vulgaris
Phvul.009G107800 1.0kb downstream 1.0kb downstream 8474 true Chr09: 16716943-16725416 Phaseolus vulgaris
Phvul.009G107800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 16716943-16717942 Phaseolus vulgaris
Phvul.009G107800 2.0kb upstream 2.0kb upstream 9474 true Chr09: 16717943-16727416 Phaseolus vulgaris
Phvul.009G107800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 16725417-16727416 Phaseolus vulgaris
Phvul.009G107800 2.0kb downstream 2.0kb downstream 9474 true Chr09: 16715943-16725416 Phaseolus vulgaris
Phvul.009G107800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 16715943-16717942 Phaseolus vulgaris
Phvul.009G107800 5.0kb upstream 5.0kb upstream 12474 true Chr09: 16717943-16730416 Phaseolus vulgaris
Phvul.009G107800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 16725417-16730416 Phaseolus vulgaris
Phvul.009G107800 5.0kb downstream 5.0kb downstream 12474 true Chr09: 16712943-16725416 Phaseolus vulgaris
Phvul.009G107800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 16712943-16717942 Phaseolus vulgaris
Phvul.009G107800 10.0kb upstream 10.0kb upstream 17474 true Chr09: 16717943-16735416 Phaseolus vulgaris
Phvul.009G107800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 16725417-16735416 Phaseolus vulgaris
Phvul.009G107800 10.0kb downstream 10.0kb downstream 17474 true Chr09: 16707943-16725416 Phaseolus vulgaris
Phvul.009G107800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 16707943-16717942 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304423 5265 Fabidae View MSA
124063499 5270 Rosid View MSA
123736612 5271 Pentapetalae View MSA
122785753 5272 Eudicot View MSA
122044335 5273 Angiosperm View MSA
121345434 5274 Embryophyte View MSA
123428246 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.7259 0.0 43.2536   Low
cufflinks 29.2984 0.0 77.1899    
cufflinks 31.583 0.0 83.884    
cufflinks 26.5915 0.0 69.3962    
cufflinks 24.0493 0.0 62.5627    
cufflinks 34.4725 0.0 91.9013 High  
cufflinks 30.0756 0.0 79.2574 High  
cufflinks 37.3698 0.0 100.532 High High
cufflinks 42.6906 0.0 115.264 High High
cufflinks 26.7342 0.0 70.0883    
cufflinks 25.3048 0.0 65.9874    

0 Strain