Gene : Phvul.006G177700 P. vulgaris v2.1
Defline:  (1 of 3) PTHR22835//PTHR22835:SF189 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1789
Name:  ? Phvul.006G177700 Secondary Identifier:  ? PAC:37173014
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G177700 0.5kb upstream 0.5kb upstream 3951 true Chr06: 28042672-28046622 Phaseolus vulgaris
Phvul.006G177700 0.5kb upstream 0.5kb upstream 500 false Chr06: 28046123-28046622 Phaseolus vulgaris
Phvul.006G177700 0.5kb downstream 0.5kb downstream 3951 true Chr06: 28042172-28046122 Phaseolus vulgaris
Phvul.006G177700 0.5kb downstream 0.5kb downstream 500 false Chr06: 28042172-28042671 Phaseolus vulgaris
Phvul.006G177700 1.0kb upstream 1.0kb upstream 4451 true Chr06: 28042672-28047122 Phaseolus vulgaris
Phvul.006G177700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28046123-28047122 Phaseolus vulgaris
Phvul.006G177700 1.0kb downstream 1.0kb downstream 4451 true Chr06: 28041672-28046122 Phaseolus vulgaris
Phvul.006G177700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28041672-28042671 Phaseolus vulgaris
Phvul.006G177700 2.0kb upstream 2.0kb upstream 5451 true Chr06: 28042672-28048122 Phaseolus vulgaris
Phvul.006G177700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28046123-28048122 Phaseolus vulgaris
Phvul.006G177700 2.0kb downstream 2.0kb downstream 5451 true Chr06: 28040672-28046122 Phaseolus vulgaris
Phvul.006G177700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28040672-28042671 Phaseolus vulgaris
Phvul.006G177700 5.0kb upstream 5.0kb upstream 8451 true Chr06: 28042672-28051122 Phaseolus vulgaris
Phvul.006G177700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28046123-28051122 Phaseolus vulgaris
Phvul.006G177700 5.0kb downstream 5.0kb downstream 8451 true Chr06: 28037672-28046122 Phaseolus vulgaris
Phvul.006G177700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28037672-28042671 Phaseolus vulgaris
Phvul.006G177700 10.0kb upstream 10.0kb upstream 13451 true Chr06: 28042672-28056122 Phaseolus vulgaris
Phvul.006G177700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28046123-28056122 Phaseolus vulgaris
Phvul.006G177700 10.0kb downstream 10.0kb downstream 13451 true Chr06: 28032672-28046122 Phaseolus vulgaris
Phvul.006G177700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28032672-28042671 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313512 5265 Fabidae View MSA
124068482 5270 Rosid View MSA
123752448 5271 Pentapetalae View MSA
122797509 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2764 0.0 33.7231    
cufflinks 21.0383 0.0 55.7066    
cufflinks 33.5466 0.0 86.9133   High
cufflinks 23.5358 0.0 61.9402    
cufflinks 44.7604 0.0 115.697 High High
cufflinks 17.5742 0.0 47.1268    
cufflinks 9.49551 0.0 26.8663   Low
cufflinks 12.5399 0.0 34.4785    
cufflinks 12.2502 0.0 34.0183    
cufflinks 14.7242 0.0 40.084    
cufflinks 21.7995 0.0 57.7157    

0 Strain