Gene : Phvul.006G177500 P. vulgaris v2.1
Defline:  (1 of 3) PTHR22835//PTHR22835:SF189 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1787
Name:  ? Phvul.006G177500 Secondary Identifier:  ? PAC:37173532
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G177500 0.5kb upstream 0.5kb upstream 3747 true Chr06: 28032144-28035890 Phaseolus vulgaris
Phvul.006G177500 0.5kb upstream 0.5kb upstream 500 false Chr06: 28035391-28035890 Phaseolus vulgaris
Phvul.006G177500 0.5kb downstream 0.5kb downstream 3747 true Chr06: 28031644-28035390 Phaseolus vulgaris
Phvul.006G177500 0.5kb downstream 0.5kb downstream 500 false Chr06: 28031644-28032143 Phaseolus vulgaris
Phvul.006G177500 1.0kb upstream 1.0kb upstream 4247 true Chr06: 28032144-28036390 Phaseolus vulgaris
Phvul.006G177500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 28035391-28036390 Phaseolus vulgaris
Phvul.006G177500 1.0kb downstream 1.0kb downstream 4247 true Chr06: 28031144-28035390 Phaseolus vulgaris
Phvul.006G177500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 28031144-28032143 Phaseolus vulgaris
Phvul.006G177500 2.0kb upstream 2.0kb upstream 5247 true Chr06: 28032144-28037390 Phaseolus vulgaris
Phvul.006G177500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 28035391-28037390 Phaseolus vulgaris
Phvul.006G177500 2.0kb downstream 2.0kb downstream 5247 true Chr06: 28030144-28035390 Phaseolus vulgaris
Phvul.006G177500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 28030144-28032143 Phaseolus vulgaris
Phvul.006G177500 5.0kb upstream 5.0kb upstream 8247 true Chr06: 28032144-28040390 Phaseolus vulgaris
Phvul.006G177500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 28035391-28040390 Phaseolus vulgaris
Phvul.006G177500 5.0kb downstream 5.0kb downstream 8247 true Chr06: 28027144-28035390 Phaseolus vulgaris
Phvul.006G177500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 28027144-28032143 Phaseolus vulgaris
Phvul.006G177500 10.0kb upstream 10.0kb upstream 13247 true Chr06: 28032144-28045390 Phaseolus vulgaris
Phvul.006G177500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 28035391-28045390 Phaseolus vulgaris
Phvul.006G177500 10.0kb downstream 10.0kb downstream 13247 true Chr06: 28022144-28035390 Phaseolus vulgaris
Phvul.006G177500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 28022144-28032143 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313512 5265 Fabidae View MSA
124068482 5270 Rosid View MSA
123752448 5271 Pentapetalae View MSA
122797509 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.04836 0.0 7.3055   Low
cufflinks 4.2948 0.0 16.6072    
cufflinks 7.85136 0.0 26.0618    
cufflinks 2.57563 0.0 8.96681   Low
cufflinks 8.18398 0.0 27.2129    
cufflinks 5.83111 0.0 20.7201    
cufflinks 6.62091 0.0 26.454    
cufflinks 7.51924 0.0 28.8735    
cufflinks 4.85304 0.0 18.8424    
cufflinks 10.0434 0.0 36.8107   High
cufflinks 4.60753 0.0 17.9446    

0 Strain