Gene : Phvul.006G070500 P. vulgaris v2.1
Defline:  (1 of 2) PF02151//PF13474 - UvrB/uvrC motif (UVR) // SnoaL-like domain (SnoaL_3) Genomic Order:  689
Name:  ? Phvul.006G070500 Secondary Identifier:  ? PAC:37174184
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G070500 0.5kb upstream 0.5kb upstream 2462 true Chr06: 18265544-18268005 Phaseolus vulgaris
Phvul.006G070500 0.5kb upstream 0.5kb upstream 500 false Chr06: 18265544-18266043 Phaseolus vulgaris
Phvul.006G070500 0.5kb downstream 0.5kb downstream 2462 true Chr06: 18266044-18268505 Phaseolus vulgaris
Phvul.006G070500 0.5kb downstream 0.5kb downstream 500 false Chr06: 18268006-18268505 Phaseolus vulgaris
Phvul.006G070500 1.0kb upstream 1.0kb upstream 2962 true Chr06: 18265044-18268005 Phaseolus vulgaris
Phvul.006G070500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18265044-18266043 Phaseolus vulgaris
Phvul.006G070500 1.0kb downstream 1.0kb downstream 2962 true Chr06: 18266044-18269005 Phaseolus vulgaris
Phvul.006G070500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18268006-18269005 Phaseolus vulgaris
Phvul.006G070500 2.0kb upstream 2.0kb upstream 3962 true Chr06: 18264044-18268005 Phaseolus vulgaris
Phvul.006G070500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18264044-18266043 Phaseolus vulgaris
Phvul.006G070500 2.0kb downstream 2.0kb downstream 3962 true Chr06: 18266044-18270005 Phaseolus vulgaris
Phvul.006G070500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18268006-18270005 Phaseolus vulgaris
Phvul.006G070500 5.0kb upstream 5.0kb upstream 6962 true Chr06: 18261044-18268005 Phaseolus vulgaris
Phvul.006G070500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18261044-18266043 Phaseolus vulgaris
Phvul.006G070500 5.0kb downstream 5.0kb downstream 6962 true Chr06: 18266044-18273005 Phaseolus vulgaris
Phvul.006G070500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18268006-18273005 Phaseolus vulgaris
Phvul.006G070500 10.0kb upstream 10.0kb upstream 11962 true Chr06: 18256044-18268005 Phaseolus vulgaris
Phvul.006G070500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18256044-18266043 Phaseolus vulgaris
Phvul.006G070500 10.0kb downstream 10.0kb downstream 11962 true Chr06: 18266044-18278005 Phaseolus vulgaris
Phvul.006G070500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18268006-18278005 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300001 5265 Fabidae View MSA
124061474 5270 Rosid View MSA
123738801 5271 Pentapetalae View MSA
122791549 5272 Eudicot View MSA
122042270 5273 Angiosperm View MSA
121344276 5274 Embryophyte View MSA
123425635 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.3167 0.0 62.094   High
cufflinks 10.0381 0.0 34.1758    
cufflinks 13.8822 0.0 43.8146   High
cufflinks 9.27666 0.0 32.2159    
cufflinks 5.80964 0.0 24.0924    
cufflinks 9.44576 0.0 32.5007    
cufflinks 5.01523 0.0 20.4108   Low
cufflinks 7.3908 0.0 26.4499    
cufflinks 5.86548 0.0 23.0672    
cufflinks 7.01724 0.0 30.7949    
cufflinks 6.45173 0.0 25.0432    

0 Strain