Gene : Phvul.006G059218 P. vulgaris v2.1
Defline:  (1 of 2) PTHR21716 - TRANSMEMBRANE PROTEIN Genomic Order:  553
Name:  ? Phvul.006G059218 Secondary Identifier:  ? PAC:37173340
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G059218 0.5kb upstream 0.5kb upstream 4917 true Chr06: 16651978-16656894 Phaseolus vulgaris
Phvul.006G059218 0.5kb upstream 0.5kb upstream 500 false Chr06: 16651978-16652477 Phaseolus vulgaris
Phvul.006G059218 0.5kb downstream 0.5kb downstream 4917 true Chr06: 16652478-16657394 Phaseolus vulgaris
Phvul.006G059218 0.5kb downstream 0.5kb downstream 500 false Chr06: 16656895-16657394 Phaseolus vulgaris
Phvul.006G059218 1.0kb upstream 1.0kb upstream 5417 true Chr06: 16651478-16656894 Phaseolus vulgaris
Phvul.006G059218 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16651478-16652477 Phaseolus vulgaris
Phvul.006G059218 1.0kb downstream 1.0kb downstream 5417 true Chr06: 16652478-16657894 Phaseolus vulgaris
Phvul.006G059218 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16656895-16657894 Phaseolus vulgaris
Phvul.006G059218 2.0kb upstream 2.0kb upstream 6417 true Chr06: 16650478-16656894 Phaseolus vulgaris
Phvul.006G059218 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16650478-16652477 Phaseolus vulgaris
Phvul.006G059218 2.0kb downstream 2.0kb downstream 6417 true Chr06: 16652478-16658894 Phaseolus vulgaris
Phvul.006G059218 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16656895-16658894 Phaseolus vulgaris
Phvul.006G059218 5.0kb upstream 5.0kb upstream 9417 true Chr06: 16647478-16656894 Phaseolus vulgaris
Phvul.006G059218 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16647478-16652477 Phaseolus vulgaris
Phvul.006G059218 5.0kb downstream 5.0kb downstream 9417 true Chr06: 16652478-16661894 Phaseolus vulgaris
Phvul.006G059218 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16656895-16661894 Phaseolus vulgaris
Phvul.006G059218 10.0kb upstream 10.0kb upstream 14417 true Chr06: 16642478-16656894 Phaseolus vulgaris
Phvul.006G059218 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16642478-16652477 Phaseolus vulgaris
Phvul.006G059218 10.0kb downstream 10.0kb downstream 14417 true Chr06: 16652478-16666894 Phaseolus vulgaris
Phvul.006G059218 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16656895-16666894 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299195 5265 Fabidae View MSA
124073302 5270 Rosid View MSA
123750556 5271 Pentapetalae View MSA
122792038 5272 Eudicot View MSA
122049890 5273 Angiosperm View MSA
121348658 5274 Embryophyte View MSA
123426031 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.42281 0.0 17.122   Low
cufflinks 6.66021 0.0 23.7789    
cufflinks 25.9831 0.0 82.7549   High
cufflinks 4.97245 0.0 16.353   Low
cufflinks 12.2781 0.0 39.7804    
cufflinks 16.7438 0.0 52.9291   High
cufflinks 8.26315 0.0 24.6443    
cufflinks 6.75356 0.0 24.0137    
cufflinks 9.92986 0.0 33.3189    
cufflinks 5.64017 0.0 20.7889    
cufflinks 12.9385 0.0 41.7266    

0 Strain