Gene : Phvul.007G262400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12197:SF145 - SET DOMAIN-CONTAINING PROTEIN Genomic Order:  2481
Name:  ? Phvul.007G262400 Secondary Identifier:  ? PAC:37166664
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G262400 0.5kb upstream 0.5kb upstream 6331 true Chr07: 38432084-38438414 Phaseolus vulgaris
Phvul.007G262400 0.5kb upstream 0.5kb upstream 500 false Chr07: 38437915-38438414 Phaseolus vulgaris
Phvul.007G262400 0.5kb downstream 0.5kb downstream 6331 true Chr07: 38431584-38437914 Phaseolus vulgaris
Phvul.007G262400 0.5kb downstream 0.5kb downstream 500 false Chr07: 38431584-38432083 Phaseolus vulgaris
Phvul.007G262400 1.0kb upstream 1.0kb upstream 6831 true Chr07: 38432084-38438914 Phaseolus vulgaris
Phvul.007G262400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 38437915-38438914 Phaseolus vulgaris
Phvul.007G262400 1.0kb downstream 1.0kb downstream 6831 true Chr07: 38431084-38437914 Phaseolus vulgaris
Phvul.007G262400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 38431084-38432083 Phaseolus vulgaris
Phvul.007G262400 2.0kb upstream 2.0kb upstream 7831 true Chr07: 38432084-38439914 Phaseolus vulgaris
Phvul.007G262400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 38437915-38439914 Phaseolus vulgaris
Phvul.007G262400 2.0kb downstream 2.0kb downstream 7831 true Chr07: 38430084-38437914 Phaseolus vulgaris
Phvul.007G262400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 38430084-38432083 Phaseolus vulgaris
Phvul.007G262400 5.0kb upstream 5.0kb upstream 10831 true Chr07: 38432084-38442914 Phaseolus vulgaris
Phvul.007G262400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 38437915-38442914 Phaseolus vulgaris
Phvul.007G262400 5.0kb downstream 5.0kb downstream 10831 true Chr07: 38427084-38437914 Phaseolus vulgaris
Phvul.007G262400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 38427084-38432083 Phaseolus vulgaris
Phvul.007G262400 10.0kb upstream 10.0kb upstream 15831 true Chr07: 38432084-38447914 Phaseolus vulgaris
Phvul.007G262400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 38437915-38447914 Phaseolus vulgaris
Phvul.007G262400 10.0kb downstream 10.0kb downstream 15831 true Chr07: 38422084-38437914 Phaseolus vulgaris
Phvul.007G262400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 38422084-38432083 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308306 5265 Fabidae View MSA
124037151 5270 Rosid View MSA
123740092 5271 Pentapetalae View MSA
122789210 5272 Eudicot View MSA
122047445 5273 Angiosperm View MSA
121345734 5274 Embryophyte View MSA
123425197 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.84603 0.0 8.68572    
cufflinks 2.88095 0.0 12.3652   High
cufflinks 2.81945 0.0 12.3671   High
cufflinks 2.42734 0.0 10.6804    
cufflinks 2.39378 0.0 10.8374    
cufflinks 2.2381 0.0 8.03425    
cufflinks 1.72145 0.0 8.43748    
cufflinks 1.68583 0.0 8.24091   Low
cufflinks 1.50847 0.0 8.05512   Low
cufflinks 2.39021 0.0 10.6718    
cufflinks 1.90754 0.0 9.49114    

0 Strain