Gene : Phvul.010G008900 P. vulgaris v2.1
Defline:  (1 of 40) PF00582 - Universal stress protein family (Usp) Genomic Order:  84
Name:  ? Phvul.010G008900 Secondary Identifier:  ? PAC:37143751
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G008900 0.5kb upstream 0.5kb upstream 3054 true Chr10: 1268630-1271683 Phaseolus vulgaris
Phvul.010G008900 0.5kb upstream 0.5kb upstream 500 false Chr10: 1271184-1271683 Phaseolus vulgaris
Phvul.010G008900 0.5kb downstream 0.5kb downstream 3054 true Chr10: 1268130-1271183 Phaseolus vulgaris
Phvul.010G008900 0.5kb downstream 0.5kb downstream 500 false Chr10: 1268130-1268629 Phaseolus vulgaris
Phvul.010G008900 1.0kb upstream 1.0kb upstream 3554 true Chr10: 1268630-1272183 Phaseolus vulgaris
Phvul.010G008900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1271184-1272183 Phaseolus vulgaris
Phvul.010G008900 1.0kb downstream 1.0kb downstream 3554 true Chr10: 1267630-1271183 Phaseolus vulgaris
Phvul.010G008900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1267630-1268629 Phaseolus vulgaris
Phvul.010G008900 2.0kb upstream 2.0kb upstream 4554 true Chr10: 1268630-1273183 Phaseolus vulgaris
Phvul.010G008900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1271184-1273183 Phaseolus vulgaris
Phvul.010G008900 2.0kb downstream 2.0kb downstream 4554 true Chr10: 1266630-1271183 Phaseolus vulgaris
Phvul.010G008900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1266630-1268629 Phaseolus vulgaris
Phvul.010G008900 5.0kb upstream 5.0kb upstream 7554 true Chr10: 1268630-1276183 Phaseolus vulgaris
Phvul.010G008900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1271184-1276183 Phaseolus vulgaris
Phvul.010G008900 5.0kb downstream 5.0kb downstream 7554 true Chr10: 1263630-1271183 Phaseolus vulgaris
Phvul.010G008900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1263630-1268629 Phaseolus vulgaris
Phvul.010G008900 10.0kb upstream 10.0kb upstream 12554 true Chr10: 1268630-1281183 Phaseolus vulgaris
Phvul.010G008900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1271184-1281183 Phaseolus vulgaris
Phvul.010G008900 10.0kb downstream 10.0kb downstream 12554 true Chr10: 1258630-1271183 Phaseolus vulgaris
Phvul.010G008900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1258630-1268629 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303536 5265 Fabidae View MSA
124061330 5270 Rosid View MSA
123742988 5271 Pentapetalae View MSA
122795683 5272 Eudicot View MSA
122048128 5273 Angiosperm View MSA
121348607 5274 Embryophyte View MSA
123427901 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 163.33 0.0 442.473 High  
cufflinks 158.554 0.0 427.853 High  
cufflinks 61.6256 0.0 159.294 High  
cufflinks 379.955 0.0 1127.02 High High
cufflinks 71.4605 0.0 184.764 High  
cufflinks 46.231 0.0 119.877 High Low
cufflinks 43.1744 0.0 112.187 High Low
cufflinks 50.3801 0.0 130.381 High  
cufflinks 87.0665 0.0 226.233 High  
cufflinks 115.117 0.0 302.69 High  
cufflinks 75.8809 0.0 196.372 High  

0 Strain