Gene : Phvul.005G092400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13270 - PROTEIN C20ORF116-RELATED Genomic Order:  922
Name:  ? Phvul.005G092400 Secondary Identifier:  ? PAC:37152625
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G092400 0.5kb upstream 0.5kb upstream 7147 true Chr05: 28665424-28672570 Phaseolus vulgaris
Phvul.005G092400 0.5kb upstream 0.5kb upstream 500 false Chr05: 28665424-28665923 Phaseolus vulgaris
Phvul.005G092400 0.5kb downstream 0.5kb downstream 7147 true Chr05: 28665924-28673070 Phaseolus vulgaris
Phvul.005G092400 0.5kb downstream 0.5kb downstream 500 false Chr05: 28672571-28673070 Phaseolus vulgaris
Phvul.005G092400 1.0kb upstream 1.0kb upstream 7647 true Chr05: 28664924-28672570 Phaseolus vulgaris
Phvul.005G092400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 28664924-28665923 Phaseolus vulgaris
Phvul.005G092400 1.0kb downstream 1.0kb downstream 7647 true Chr05: 28665924-28673570 Phaseolus vulgaris
Phvul.005G092400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 28672571-28673570 Phaseolus vulgaris
Phvul.005G092400 2.0kb upstream 2.0kb upstream 8647 true Chr05: 28663924-28672570 Phaseolus vulgaris
Phvul.005G092400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 28663924-28665923 Phaseolus vulgaris
Phvul.005G092400 2.0kb downstream 2.0kb downstream 8647 true Chr05: 28665924-28674570 Phaseolus vulgaris
Phvul.005G092400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 28672571-28674570 Phaseolus vulgaris
Phvul.005G092400 5.0kb upstream 5.0kb upstream 11647 true Chr05: 28660924-28672570 Phaseolus vulgaris
Phvul.005G092400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 28660924-28665923 Phaseolus vulgaris
Phvul.005G092400 5.0kb downstream 5.0kb downstream 11647 true Chr05: 28665924-28677570 Phaseolus vulgaris
Phvul.005G092400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 28672571-28677570 Phaseolus vulgaris
Phvul.005G092400 10.0kb upstream 10.0kb upstream 16647 true Chr05: 28655924-28672570 Phaseolus vulgaris
Phvul.005G092400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 28655924-28665923 Phaseolus vulgaris
Phvul.005G092400 10.0kb downstream 10.0kb downstream 16647 true Chr05: 28665924-28682570 Phaseolus vulgaris
Phvul.005G092400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 28672571-28682570 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299765 5265 Fabidae View MSA
124064342 5270 Rosid View MSA
123740748 5271 Pentapetalae View MSA
122787568 5272 Eudicot View MSA
122042845 5273 Angiosperm View MSA
121345530 5274 Embryophyte View MSA
123425622 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0899 0.0 39.568    
cufflinks 11.3138 0.0 30.1833    
cufflinks 9.18795 0.0 24.9567   Low
cufflinks 12.6891 0.0 33.7812    
cufflinks 13.7373 0.0 36.3607    
cufflinks 8.35009 0.0 22.8325   Low
cufflinks 13.0638 0.0 34.396    
cufflinks 14.8169 0.0 38.7425    
cufflinks 13.871 0.0 36.4268    
cufflinks 15.4238 0.0 40.4168    
cufflinks 16.921 0.0 44.1212   High

0 Strain