Gene : Phvul.004G166400 P. vulgaris v2.1
Defline:  (1 of 28) K14484 - auxin-responsive protein IAA (IAA) Genomic Order:  1707
Name:  ? Phvul.004G166400 Secondary Identifier:  ? PAC:37162211
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G166400 0.5kb upstream 0.5kb upstream 3595 true Chr04: 47047403-47050997 Phaseolus vulgaris
Phvul.004G166400 0.5kb upstream 0.5kb upstream 500 false Chr04: 47047403-47047902 Phaseolus vulgaris
Phvul.004G166400 0.5kb downstream 0.5kb downstream 3595 true Chr04: 47047903-47051497 Phaseolus vulgaris
Phvul.004G166400 0.5kb downstream 0.5kb downstream 500 false Chr04: 47050998-47051497 Phaseolus vulgaris
Phvul.004G166400 1.0kb upstream 1.0kb upstream 4095 true Chr04: 47046903-47050997 Phaseolus vulgaris
Phvul.004G166400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 47046903-47047902 Phaseolus vulgaris
Phvul.004G166400 1.0kb downstream 1.0kb downstream 4095 true Chr04: 47047903-47051997 Phaseolus vulgaris
Phvul.004G166400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 47050998-47051997 Phaseolus vulgaris
Phvul.004G166400 2.0kb upstream 2.0kb upstream 5095 true Chr04: 47045903-47050997 Phaseolus vulgaris
Phvul.004G166400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 47045903-47047902 Phaseolus vulgaris
Phvul.004G166400 2.0kb downstream 2.0kb downstream 5095 true Chr04: 47047903-47052997 Phaseolus vulgaris
Phvul.004G166400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 47050998-47052997 Phaseolus vulgaris
Phvul.004G166400 5.0kb upstream 5.0kb upstream 8095 true Chr04: 47042903-47050997 Phaseolus vulgaris
Phvul.004G166400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 47042903-47047902 Phaseolus vulgaris
Phvul.004G166400 5.0kb downstream 5.0kb downstream 8095 true Chr04: 47047903-47055997 Phaseolus vulgaris
Phvul.004G166400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47050998-47055997 Phaseolus vulgaris
Phvul.004G166400 10.0kb upstream 10.0kb upstream 13095 true Chr04: 47037903-47050997 Phaseolus vulgaris
Phvul.004G166400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 47037903-47047902 Phaseolus vulgaris
Phvul.004G166400 10.0kb downstream 10.0kb downstream 13095 true Chr04: 47047903-47060997 Phaseolus vulgaris
Phvul.004G166400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 47050998-47060997 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308541 5265 Fabidae View MSA
124070814 5270 Rosid View MSA
123750768 5271 Pentapetalae View MSA
122791591 5272 Eudicot View MSA
122051273 5273 Angiosperm View MSA
121350717 5274 Embryophyte View MSA
123381856 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.46916 0.0 28.4529    
cufflinks 19.3802 0.0 62.0546    
cufflinks 5.88297 0.0 23.2599    
cufflinks 7.04813 0.0 27.6829    
cufflinks 37.5064 0.0 117.607 High High
cufflinks 5.2184 0.0 21.3142    
cufflinks 8.09507 0.0 29.7522    
cufflinks 2.88968 0.0 11.5959   Low
cufflinks 18.7373 0.0 60.0276    
cufflinks 27.6339 0.0 86.6182    
cufflinks 41.9104 0.0 131.945 High High

0 Strain