Gene : Phvul.007G162150 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22957:SF328 - RABGAP/TBC DOMAIN-CONTAINING PROTEIN Genomic Order:  1478
Name:  ? Phvul.007G162150 Secondary Identifier:  ? PAC:37164870
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G162150 0.5kb upstream 0.5kb upstream 25654 true Chr07: 27369036-27394689 Phaseolus vulgaris
Phvul.007G162150 0.5kb upstream 0.5kb upstream 500 false Chr07: 27369036-27369535 Phaseolus vulgaris
Phvul.007G162150 0.5kb downstream 0.5kb downstream 25654 true Chr07: 27369536-27395189 Phaseolus vulgaris
Phvul.007G162150 0.5kb downstream 0.5kb downstream 500 false Chr07: 27394690-27395189 Phaseolus vulgaris
Phvul.007G162150 1.0kb upstream 1.0kb upstream 26154 true Chr07: 27368536-27394689 Phaseolus vulgaris
Phvul.007G162150 1.0kb upstream 1.0kb upstream 1000 false Chr07: 27368536-27369535 Phaseolus vulgaris
Phvul.007G162150 1.0kb downstream 1.0kb downstream 26154 true Chr07: 27369536-27395689 Phaseolus vulgaris
Phvul.007G162150 1.0kb downstream 1.0kb downstream 1000 false Chr07: 27394690-27395689 Phaseolus vulgaris
Phvul.007G162150 2.0kb upstream 2.0kb upstream 27154 true Chr07: 27367536-27394689 Phaseolus vulgaris
Phvul.007G162150 2.0kb upstream 2.0kb upstream 2000 false Chr07: 27367536-27369535 Phaseolus vulgaris
Phvul.007G162150 2.0kb downstream 2.0kb downstream 27154 true Chr07: 27369536-27396689 Phaseolus vulgaris
Phvul.007G162150 2.0kb downstream 2.0kb downstream 2000 false Chr07: 27394690-27396689 Phaseolus vulgaris
Phvul.007G162150 5.0kb upstream 5.0kb upstream 30154 true Chr07: 27364536-27394689 Phaseolus vulgaris
Phvul.007G162150 5.0kb upstream 5.0kb upstream 5000 false Chr07: 27364536-27369535 Phaseolus vulgaris
Phvul.007G162150 5.0kb downstream 5.0kb downstream 30154 true Chr07: 27369536-27399689 Phaseolus vulgaris
Phvul.007G162150 5.0kb downstream 5.0kb downstream 5000 false Chr07: 27394690-27399689 Phaseolus vulgaris
Phvul.007G162150 10.0kb upstream 10.0kb upstream 35154 true Chr07: 27359536-27394689 Phaseolus vulgaris
Phvul.007G162150 10.0kb upstream 10.0kb upstream 10000 false Chr07: 27359536-27369535 Phaseolus vulgaris
Phvul.007G162150 10.0kb downstream 10.0kb downstream 35154 true Chr07: 27369536-27404689 Phaseolus vulgaris
Phvul.007G162150 10.0kb downstream 10.0kb downstream 10000 false Chr07: 27394690-27404689 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310200 5265 Fabidae View MSA
124069487 5270 Rosid View MSA
123745324 5271 Pentapetalae View MSA
122795755 5272 Eudicot View MSA
122044400 5273 Angiosperm View MSA
121345248 5274 Embryophyte View MSA
123428184 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.35279 0.0 4.18477    
cufflinks 0.791002 0.0 2.60054    
cufflinks 1.30698 0.0 4.05739    
cufflinks 0.777498 0.0 2.59501    
cufflinks 1.23458 0.0 3.90338    
cufflinks 0.620679 0.0 2.09514    
cufflinks 2.23546 0.0 6.51519    
cufflinks 23.5785 0.0 61.9861   High
cufflinks 0.93977 0.0 3.02709    
cufflinks 2.93722 0.0 8.35328    
cufflinks 0.751377 0.0 2.50043    

0 Strain