Gene : Phvul.007G179201 P. vulgaris v2.1
Defline:  (1 of 2) K14810 - ATP-dependent RNA helicase DDX56/DBP9 [EC:3.6.4.13] (DDX56, DBP9) Genomic Order:  1653
Name:  ? Phvul.007G179201 Secondary Identifier:  ? PAC:37165627
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G179201 0.5kb upstream 0.5kb upstream 10161 true Chr07: 29946478-29956638 Phaseolus vulgaris
Phvul.007G179201 0.5kb upstream 0.5kb upstream 500 false Chr07: 29956139-29956638 Phaseolus vulgaris
Phvul.007G179201 0.5kb downstream 0.5kb downstream 10161 true Chr07: 29945978-29956138 Phaseolus vulgaris
Phvul.007G179201 0.5kb downstream 0.5kb downstream 500 false Chr07: 29945978-29946477 Phaseolus vulgaris
Phvul.007G179201 1.0kb upstream 1.0kb upstream 10661 true Chr07: 29946478-29957138 Phaseolus vulgaris
Phvul.007G179201 1.0kb upstream 1.0kb upstream 1000 false Chr07: 29956139-29957138 Phaseolus vulgaris
Phvul.007G179201 1.0kb downstream 1.0kb downstream 10661 true Chr07: 29945478-29956138 Phaseolus vulgaris
Phvul.007G179201 1.0kb downstream 1.0kb downstream 1000 false Chr07: 29945478-29946477 Phaseolus vulgaris
Phvul.007G179201 2.0kb upstream 2.0kb upstream 11661 true Chr07: 29946478-29958138 Phaseolus vulgaris
Phvul.007G179201 2.0kb upstream 2.0kb upstream 2000 false Chr07: 29956139-29958138 Phaseolus vulgaris
Phvul.007G179201 2.0kb downstream 2.0kb downstream 11661 true Chr07: 29944478-29956138 Phaseolus vulgaris
Phvul.007G179201 2.0kb downstream 2.0kb downstream 2000 false Chr07: 29944478-29946477 Phaseolus vulgaris
Phvul.007G179201 5.0kb upstream 5.0kb upstream 14661 true Chr07: 29946478-29961138 Phaseolus vulgaris
Phvul.007G179201 5.0kb upstream 5.0kb upstream 5000 false Chr07: 29956139-29961138 Phaseolus vulgaris
Phvul.007G179201 5.0kb downstream 5.0kb downstream 14661 true Chr07: 29941478-29956138 Phaseolus vulgaris
Phvul.007G179201 5.0kb downstream 5.0kb downstream 5000 false Chr07: 29941478-29946477 Phaseolus vulgaris
Phvul.007G179201 10.0kb upstream 10.0kb upstream 19661 true Chr07: 29946478-29966138 Phaseolus vulgaris
Phvul.007G179201 10.0kb upstream 10.0kb upstream 10000 false Chr07: 29956139-29966138 Phaseolus vulgaris
Phvul.007G179201 10.0kb downstream 10.0kb downstream 19661 true Chr07: 29936478-29956138 Phaseolus vulgaris
Phvul.007G179201 10.0kb downstream 10.0kb downstream 10000 false Chr07: 29936478-29946477 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041039 5273 Angiosperm View MSA
122304520 5265 Fabidae View MSA
124050268 5270 Rosid View MSA
123750448 5271 Pentapetalae View MSA
122793335 5272 Eudicot View MSA
121343805 5274 Embryophyte View MSA
123424907 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.2452 0.0 29.1451   Low
cufflinks 9.80024 0.0 37.1528    
cufflinks 10.1127 0.0 38.4666    
cufflinks 6.32293 0.0 27.3846   Low
cufflinks 9.00009 0.0 35.1917    
cufflinks 9.48898 0.0 36.1805    
cufflinks 10.9269 0.0 36.6526    
cufflinks 12.2451 0.0 44.7096   High
cufflinks 10.9779 0.0 41.9443    
cufflinks 9.43877 0.0 36.0722    
cufflinks 8.61966 0.0 30.2632    

0 Strain