Gene : Phvul.007G067600 P. vulgaris v2.1
Defline:  (1 of 3) K19044 - E3 ubiquitin-protein ligase XBAT32/33 [EC:6.3.2.19] (XBAT32_33) Genomic Order:  682
Name:  ? Phvul.007G067600 Secondary Identifier:  ? PAC:37167558
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G067600 0.5kb upstream 0.5kb upstream 5457 true Chr07: 6225054-6230510 Phaseolus vulgaris
Phvul.007G067600 0.5kb upstream 0.5kb upstream 500 false Chr07: 6225054-6225553 Phaseolus vulgaris
Phvul.007G067600 0.5kb downstream 0.5kb downstream 5457 true Chr07: 6225554-6231010 Phaseolus vulgaris
Phvul.007G067600 0.5kb downstream 0.5kb downstream 500 false Chr07: 6230511-6231010 Phaseolus vulgaris
Phvul.007G067600 1.0kb upstream 1.0kb upstream 5957 true Chr07: 6224554-6230510 Phaseolus vulgaris
Phvul.007G067600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6224554-6225553 Phaseolus vulgaris
Phvul.007G067600 1.0kb downstream 1.0kb downstream 5957 true Chr07: 6225554-6231510 Phaseolus vulgaris
Phvul.007G067600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6230511-6231510 Phaseolus vulgaris
Phvul.007G067600 2.0kb upstream 2.0kb upstream 6957 true Chr07: 6223554-6230510 Phaseolus vulgaris
Phvul.007G067600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6223554-6225553 Phaseolus vulgaris
Phvul.007G067600 2.0kb downstream 2.0kb downstream 6957 true Chr07: 6225554-6232510 Phaseolus vulgaris
Phvul.007G067600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6230511-6232510 Phaseolus vulgaris
Phvul.007G067600 5.0kb upstream 5.0kb upstream 9957 true Chr07: 6220554-6230510 Phaseolus vulgaris
Phvul.007G067600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6220554-6225553 Phaseolus vulgaris
Phvul.007G067600 5.0kb downstream 5.0kb downstream 9957 true Chr07: 6225554-6235510 Phaseolus vulgaris
Phvul.007G067600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6230511-6235510 Phaseolus vulgaris
Phvul.007G067600 10.0kb upstream 10.0kb upstream 14957 true Chr07: 6215554-6230510 Phaseolus vulgaris
Phvul.007G067600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6215554-6225553 Phaseolus vulgaris
Phvul.007G067600 10.0kb downstream 10.0kb downstream 14957 true Chr07: 6225554-6240510 Phaseolus vulgaris
Phvul.007G067600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6230511-6240510 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311644 5265 Fabidae View MSA
124061674 5270 Rosid View MSA
123746531 5271 Pentapetalae View MSA
122792004 5272 Eudicot View MSA
122042206 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348775 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.5104 0.0 127.621 High High
cufflinks 8.26666 0.0 29.3794    
cufflinks 7.77706 0.0 27.1855    
cufflinks 3.97113 0.0 16.2593   Low
cufflinks 8.97401 0.0 30.8101    
cufflinks 9.17448 0.0 31.1217    
cufflinks 14.1321 0.0 45.7387    
cufflinks 6.34907 0.0 23.1128    
cufflinks 14.5893 0.0 46.8883    
cufflinks 9.77088 0.0 33.0382    
cufflinks 9.61181 0.0 32.5829    

0 Strain