Gene : Phvul.007G085100 P. vulgaris v2.1
Defline:  (1 of 2) PF07343 - Protein of unknown function (DUF1475) (DUF1475) Genomic Order:  859
Name:  ? Phvul.007G085100 Secondary Identifier:  ? PAC:37167130
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G085100 0.5kb upstream 0.5kb upstream 5947 true Chr07: 8601795-8607741 Phaseolus vulgaris
Phvul.007G085100 0.5kb upstream 0.5kb upstream 500 false Chr07: 8607242-8607741 Phaseolus vulgaris
Phvul.007G085100 0.5kb downstream 0.5kb downstream 5947 true Chr07: 8601295-8607241 Phaseolus vulgaris
Phvul.007G085100 0.5kb downstream 0.5kb downstream 500 false Chr07: 8601295-8601794 Phaseolus vulgaris
Phvul.007G085100 1.0kb upstream 1.0kb upstream 6447 true Chr07: 8601795-8608241 Phaseolus vulgaris
Phvul.007G085100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8607242-8608241 Phaseolus vulgaris
Phvul.007G085100 1.0kb downstream 1.0kb downstream 6447 true Chr07: 8600795-8607241 Phaseolus vulgaris
Phvul.007G085100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8600795-8601794 Phaseolus vulgaris
Phvul.007G085100 2.0kb upstream 2.0kb upstream 7447 true Chr07: 8601795-8609241 Phaseolus vulgaris
Phvul.007G085100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8607242-8609241 Phaseolus vulgaris
Phvul.007G085100 2.0kb downstream 2.0kb downstream 7447 true Chr07: 8599795-8607241 Phaseolus vulgaris
Phvul.007G085100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8599795-8601794 Phaseolus vulgaris
Phvul.007G085100 5.0kb upstream 5.0kb upstream 10447 true Chr07: 8601795-8612241 Phaseolus vulgaris
Phvul.007G085100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8607242-8612241 Phaseolus vulgaris
Phvul.007G085100 5.0kb downstream 5.0kb downstream 10447 true Chr07: 8596795-8607241 Phaseolus vulgaris
Phvul.007G085100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8596795-8601794 Phaseolus vulgaris
Phvul.007G085100 10.0kb upstream 10.0kb upstream 15447 true Chr07: 8601795-8617241 Phaseolus vulgaris
Phvul.007G085100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8607242-8617241 Phaseolus vulgaris
Phvul.007G085100 10.0kb downstream 10.0kb downstream 15447 true Chr07: 8591795-8607241 Phaseolus vulgaris
Phvul.007G085100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8591795-8601794 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026258 5273 Angiosperm View MSA
122307319 5265 Fabidae View MSA
124062970 5270 Rosid View MSA
123738369 5271 Pentapetalae View MSA
122787802 5272 Eudicot View MSA
121296248 5274 Embryophyte View MSA
123334445 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.5446 0.0 112.946 High High
cufflinks 9.75249 0.0 28.4968    
cufflinks 10.0736 0.0 29.2549    
cufflinks 20.6422 0.0 56.2704    
cufflinks 7.51689 0.0 22.7863    
cufflinks 11.7906 0.0 33.7895    
cufflinks 0.201917 0.0 0.859649 Low Low
cufflinks 0.577912 0.0 2.25142   Low
cufflinks 0.279504 0.0 1.15934 Low Low
cufflinks 14.3182 0.0 40.2535    
cufflinks 6.65323 0.0 20.459    

0 Strain