Gene : Phvul.004G041800 P. vulgaris v2.1
Defline:  (1 of 3) 1.14.11.11 - Hyoscyamine (6S)-dioxygenase / Hyoscyamine 6-beta-hydroxylase Genomic Order:  454
Name:  ? Phvul.004G041800 Secondary Identifier:  ? PAC:37161834
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G041800 0.5kb upstream 0.5kb upstream 3908 true Chr04: 4967974-4971881 Phaseolus vulgaris
Phvul.004G041800 0.5kb upstream 0.5kb upstream 500 false Chr04: 4971382-4971881 Phaseolus vulgaris
Phvul.004G041800 0.5kb downstream 0.5kb downstream 3908 true Chr04: 4967474-4971381 Phaseolus vulgaris
Phvul.004G041800 0.5kb downstream 0.5kb downstream 500 false Chr04: 4967474-4967973 Phaseolus vulgaris
Phvul.004G041800 1.0kb upstream 1.0kb upstream 4408 true Chr04: 4967974-4972381 Phaseolus vulgaris
Phvul.004G041800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4971382-4972381 Phaseolus vulgaris
Phvul.004G041800 1.0kb downstream 1.0kb downstream 4408 true Chr04: 4966974-4971381 Phaseolus vulgaris
Phvul.004G041800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4966974-4967973 Phaseolus vulgaris
Phvul.004G041800 2.0kb upstream 2.0kb upstream 5408 true Chr04: 4967974-4973381 Phaseolus vulgaris
Phvul.004G041800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4971382-4973381 Phaseolus vulgaris
Phvul.004G041800 2.0kb downstream 2.0kb downstream 5408 true Chr04: 4965974-4971381 Phaseolus vulgaris
Phvul.004G041800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4965974-4967973 Phaseolus vulgaris
Phvul.004G041800 5.0kb upstream 5.0kb upstream 8408 true Chr04: 4967974-4976381 Phaseolus vulgaris
Phvul.004G041800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4971382-4976381 Phaseolus vulgaris
Phvul.004G041800 5.0kb downstream 5.0kb downstream 8408 true Chr04: 4962974-4971381 Phaseolus vulgaris
Phvul.004G041800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4962974-4967973 Phaseolus vulgaris
Phvul.004G041800 10.0kb upstream 10.0kb upstream 13408 true Chr04: 4967974-4981381 Phaseolus vulgaris
Phvul.004G041800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4971382-4981381 Phaseolus vulgaris
Phvul.004G041800 10.0kb downstream 10.0kb downstream 13408 true Chr04: 4957974-4971381 Phaseolus vulgaris
Phvul.004G041800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4957974-4967973 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657022 5273 Angiosperm View MSA
122309538 5265 Fabidae View MSA
124038049 5270 Rosid View MSA
123610625 5271 Pentapetalae View MSA
122645226 5272 Eudicot View MSA
120929076 5274 Embryophyte View MSA
122969651 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.101991 0.0 0.462483 Low Low
cufflinks 0.128284 0.0 0.564225 Low  
cufflinks 0.0610908 0.0 0.315996 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 18.0538 0.0 72.7551    
cufflinks 15.4565 0.0 63.1093    
cufflinks 11.4528 0.0 44.2636    
cufflinks 4.01653 0.0 20.5536    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain