Gene : Phvul.003G147200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11615//PTHR11615:SF161 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  1495
Name:  ? Phvul.003G147200 Secondary Identifier:  ? PAC:37146473
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G147200 0.5kb upstream 0.5kb upstream 2049 true Chr03: 35766625-35768673 Phaseolus vulgaris
Phvul.003G147200 0.5kb upstream 0.5kb upstream 500 false Chr03: 35768174-35768673 Phaseolus vulgaris
Phvul.003G147200 0.5kb downstream 0.5kb downstream 2049 true Chr03: 35766125-35768173 Phaseolus vulgaris
Phvul.003G147200 0.5kb downstream 0.5kb downstream 500 false Chr03: 35766125-35766624 Phaseolus vulgaris
Phvul.003G147200 1.0kb upstream 1.0kb upstream 2549 true Chr03: 35766625-35769173 Phaseolus vulgaris
Phvul.003G147200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 35768174-35769173 Phaseolus vulgaris
Phvul.003G147200 1.0kb downstream 1.0kb downstream 2549 true Chr03: 35765625-35768173 Phaseolus vulgaris
Phvul.003G147200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 35765625-35766624 Phaseolus vulgaris
Phvul.003G147200 2.0kb upstream 2.0kb upstream 3549 true Chr03: 35766625-35770173 Phaseolus vulgaris
Phvul.003G147200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 35768174-35770173 Phaseolus vulgaris
Phvul.003G147200 2.0kb downstream 2.0kb downstream 3549 true Chr03: 35764625-35768173 Phaseolus vulgaris
Phvul.003G147200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 35764625-35766624 Phaseolus vulgaris
Phvul.003G147200 5.0kb upstream 5.0kb upstream 6549 true Chr03: 35766625-35773173 Phaseolus vulgaris
Phvul.003G147200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 35768174-35773173 Phaseolus vulgaris
Phvul.003G147200 5.0kb downstream 5.0kb downstream 6549 true Chr03: 35761625-35768173 Phaseolus vulgaris
Phvul.003G147200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35761625-35766624 Phaseolus vulgaris
Phvul.003G147200 10.0kb upstream 10.0kb upstream 11549 true Chr03: 35766625-35778173 Phaseolus vulgaris
Phvul.003G147200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 35768174-35778173 Phaseolus vulgaris
Phvul.003G147200 10.0kb downstream 10.0kb downstream 11549 true Chr03: 35756625-35768173 Phaseolus vulgaris
Phvul.003G147200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35756625-35766624 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301373 5265 Fabidae View MSA
124074610 5270 Rosid View MSA
123751007 5271 Pentapetalae View MSA
122791219 5272 Eudicot View MSA
122049002 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.4068 0.0 184.951 High High
cufflinks 9.25894 0.0 27.0297    
cufflinks 6.18603 0.0 18.9051    
cufflinks 41.0449 0.0 106.786 High High
cufflinks 7.00516 0.0 21.316    
cufflinks 20.6927 0.0 56.0212    
cufflinks 0.7055 0.0 2.69876   Low
cufflinks 0.797465 0.0 3.00856   Low
cufflinks 1.83587 0.0 6.45764    
cufflinks 12.9857 0.0 36.6036    
cufflinks 19.0198 0.0 52.0773    

0 Strain