Gene : Phvul.003G169000 P. vulgaris v2.1
Defline:  (1 of 1) K12607 - CCR4-NOT transcription complex subunit 10 (CNOT10) Genomic Order:  1713
Name:  ? Phvul.003G169000 Secondary Identifier:  ? PAC:37146544
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G169000 0.5kb upstream 0.5kb upstream 7519 true Chr03: 39030849-39038367 Phaseolus vulgaris
Phvul.003G169000 0.5kb upstream 0.5kb upstream 500 false Chr03: 39030849-39031348 Phaseolus vulgaris
Phvul.003G169000 0.5kb downstream 0.5kb downstream 7519 true Chr03: 39031349-39038867 Phaseolus vulgaris
Phvul.003G169000 0.5kb downstream 0.5kb downstream 500 false Chr03: 39038368-39038867 Phaseolus vulgaris
Phvul.003G169000 1.0kb upstream 1.0kb upstream 8019 true Chr03: 39030349-39038367 Phaseolus vulgaris
Phvul.003G169000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39030349-39031348 Phaseolus vulgaris
Phvul.003G169000 1.0kb downstream 1.0kb downstream 8019 true Chr03: 39031349-39039367 Phaseolus vulgaris
Phvul.003G169000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39038368-39039367 Phaseolus vulgaris
Phvul.003G169000 2.0kb upstream 2.0kb upstream 9019 true Chr03: 39029349-39038367 Phaseolus vulgaris
Phvul.003G169000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39029349-39031348 Phaseolus vulgaris
Phvul.003G169000 2.0kb downstream 2.0kb downstream 9019 true Chr03: 39031349-39040367 Phaseolus vulgaris
Phvul.003G169000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39038368-39040367 Phaseolus vulgaris
Phvul.003G169000 5.0kb upstream 5.0kb upstream 12019 true Chr03: 39026349-39038367 Phaseolus vulgaris
Phvul.003G169000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39026349-39031348 Phaseolus vulgaris
Phvul.003G169000 5.0kb downstream 5.0kb downstream 12019 true Chr03: 39031349-39043367 Phaseolus vulgaris
Phvul.003G169000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39038368-39043367 Phaseolus vulgaris
Phvul.003G169000 10.0kb upstream 10.0kb upstream 17019 true Chr03: 39021349-39038367 Phaseolus vulgaris
Phvul.003G169000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39021349-39031348 Phaseolus vulgaris
Phvul.003G169000 10.0kb downstream 10.0kb downstream 17019 true Chr03: 39031349-39048367 Phaseolus vulgaris
Phvul.003G169000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39038368-39048367 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041333 5273 Angiosperm View MSA
122303335 5265 Fabidae View MSA
124066173 5270 Rosid View MSA
123737593 5271 Pentapetalae View MSA
122791315 5272 Eudicot View MSA
121344566 5274 Embryophyte View MSA
123426128 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.98752 0.0 20.9043   Low
cufflinks 14.4151 0.0 37.2643    
cufflinks 13.9629 0.0 36.0927    
cufflinks 8.36427 0.0 21.9276   Low
cufflinks 14.417 0.0 37.2652    
cufflinks 15.1299 0.0 39.1245    
cufflinks 13.8177 0.0 35.7171    
cufflinks 15.0764 0.0 39.0048    
cufflinks 14.919 0.0 38.5714    
cufflinks 14.8755 0.0 38.4604    
cufflinks 13.5939 0.0 35.1411    

0 Strain