Gene : Phvul.002G311500 P. vulgaris v2.1
Defline:  (1 of 28) K14484 - auxin-responsive protein IAA (IAA) Genomic Order:  3104
Name:  ? Phvul.002G311500 Secondary Identifier:  ? PAC:37178065
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G311500 0.5kb upstream 0.5kb upstream 3445 true Chr02: 47835525-47838969 Phaseolus vulgaris
Phvul.002G311500 0.5kb upstream 0.5kb upstream 500 false Chr02: 47838470-47838969 Phaseolus vulgaris
Phvul.002G311500 0.5kb downstream 0.5kb downstream 3445 true Chr02: 47835025-47838469 Phaseolus vulgaris
Phvul.002G311500 0.5kb downstream 0.5kb downstream 500 false Chr02: 47835025-47835524 Phaseolus vulgaris
Phvul.002G311500 1.0kb upstream 1.0kb upstream 3945 true Chr02: 47835525-47839469 Phaseolus vulgaris
Phvul.002G311500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47838470-47839469 Phaseolus vulgaris
Phvul.002G311500 1.0kb downstream 1.0kb downstream 3945 true Chr02: 47834525-47838469 Phaseolus vulgaris
Phvul.002G311500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47834525-47835524 Phaseolus vulgaris
Phvul.002G311500 2.0kb upstream 2.0kb upstream 4945 true Chr02: 47835525-47840469 Phaseolus vulgaris
Phvul.002G311500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47838470-47840469 Phaseolus vulgaris
Phvul.002G311500 2.0kb downstream 2.0kb downstream 4945 true Chr02: 47833525-47838469 Phaseolus vulgaris
Phvul.002G311500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47833525-47835524 Phaseolus vulgaris
Phvul.002G311500 5.0kb upstream 5.0kb upstream 7945 true Chr02: 47835525-47843469 Phaseolus vulgaris
Phvul.002G311500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47838470-47843469 Phaseolus vulgaris
Phvul.002G311500 5.0kb downstream 5.0kb downstream 7945 true Chr02: 47830525-47838469 Phaseolus vulgaris
Phvul.002G311500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47830525-47835524 Phaseolus vulgaris
Phvul.002G311500 10.0kb upstream 10.0kb upstream 12945 true Chr02: 47835525-47848469 Phaseolus vulgaris
Phvul.002G311500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47838470-47848469 Phaseolus vulgaris
Phvul.002G311500 10.0kb downstream 10.0kb downstream 12945 true Chr02: 47825525-47838469 Phaseolus vulgaris
Phvul.002G311500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47825525-47835524 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308541 5265 Fabidae View MSA
124070814 5270 Rosid View MSA
123750768 5271 Pentapetalae View MSA
122791591 5272 Eudicot View MSA
122051273 5273 Angiosperm View MSA
121350717 5274 Embryophyte View MSA
123381856 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9863 0.0 47.3516    
cufflinks 108.45 0.0 299.1 High High
cufflinks 25.6082 0.0 66.3571    
cufflinks 14.5887 0.0 39.1779    
cufflinks 55.6464 0.0 145.319 High  
cufflinks 27.8725 0.0 72.1311    
cufflinks 26.5809 0.0 68.8338    
cufflinks 10.4051 0.0 28.4555   Low
cufflinks 11.0331 0.0 30.1155   Low
cufflinks 37.3194 0.0 96.5154 High  
cufflinks 96.2867 0.0 261.808 High High

0 Strain