Gene : Phvul.002G114000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR33070:SF3 - EXPRESSED PROTEIN Genomic Order:  1140
Name:  ? Phvul.002G114000 Secondary Identifier:  ? PAC:37174601
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G114000 0.5kb upstream 0.5kb upstream 1397 true Chr02: 24414054-24415450 Phaseolus vulgaris
Phvul.002G114000 0.5kb upstream 0.5kb upstream 500 false Chr02: 24414951-24415450 Phaseolus vulgaris
Phvul.002G114000 0.5kb downstream 0.5kb downstream 1397 true Chr02: 24413554-24414950 Phaseolus vulgaris
Phvul.002G114000 0.5kb downstream 0.5kb downstream 500 false Chr02: 24413554-24414053 Phaseolus vulgaris
Phvul.002G114000 1.0kb upstream 1.0kb upstream 1897 true Chr02: 24414054-24415950 Phaseolus vulgaris
Phvul.002G114000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 24414951-24415950 Phaseolus vulgaris
Phvul.002G114000 1.0kb downstream 1.0kb downstream 1897 true Chr02: 24413054-24414950 Phaseolus vulgaris
Phvul.002G114000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 24413054-24414053 Phaseolus vulgaris
Phvul.002G114000 2.0kb upstream 2.0kb upstream 2897 true Chr02: 24414054-24416950 Phaseolus vulgaris
Phvul.002G114000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 24414951-24416950 Phaseolus vulgaris
Phvul.002G114000 2.0kb downstream 2.0kb downstream 2897 true Chr02: 24412054-24414950 Phaseolus vulgaris
Phvul.002G114000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 24412054-24414053 Phaseolus vulgaris
Phvul.002G114000 5.0kb upstream 5.0kb upstream 5897 true Chr02: 24414054-24419950 Phaseolus vulgaris
Phvul.002G114000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 24414951-24419950 Phaseolus vulgaris
Phvul.002G114000 5.0kb downstream 5.0kb downstream 5897 true Chr02: 24409054-24414950 Phaseolus vulgaris
Phvul.002G114000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 24409054-24414053 Phaseolus vulgaris
Phvul.002G114000 10.0kb upstream 10.0kb upstream 10897 true Chr02: 24414054-24424950 Phaseolus vulgaris
Phvul.002G114000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 24414951-24424950 Phaseolus vulgaris
Phvul.002G114000 10.0kb downstream 10.0kb downstream 10897 true Chr02: 24404054-24414950 Phaseolus vulgaris
Phvul.002G114000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 24404054-24414053 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314618 5265 Fabidae View MSA
124069570 5270 Rosid View MSA
123753428 5271 Pentapetalae View MSA
122797760 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0547802 0.0 0.268287 Low  
cufflinks 0.803352 0.0 3.06353    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain