Gene : Phvul.002G123800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR14155:SF153 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Genomic Order:  1239
Name:  ? Phvul.002G123800 Secondary Identifier:  ? PAC:37177036
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G123800 0.5kb upstream 0.5kb upstream 5610 true Chr02: 26259880-26265489 Phaseolus vulgaris
Phvul.002G123800 0.5kb upstream 0.5kb upstream 500 false Chr02: 26264990-26265489 Phaseolus vulgaris
Phvul.002G123800 0.5kb downstream 0.5kb downstream 5610 true Chr02: 26259380-26264989 Phaseolus vulgaris
Phvul.002G123800 0.5kb downstream 0.5kb downstream 500 false Chr02: 26259380-26259879 Phaseolus vulgaris
Phvul.002G123800 1.0kb upstream 1.0kb upstream 6110 true Chr02: 26259880-26265989 Phaseolus vulgaris
Phvul.002G123800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 26264990-26265989 Phaseolus vulgaris
Phvul.002G123800 1.0kb downstream 1.0kb downstream 6110 true Chr02: 26258880-26264989 Phaseolus vulgaris
Phvul.002G123800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 26258880-26259879 Phaseolus vulgaris
Phvul.002G123800 2.0kb upstream 2.0kb upstream 7110 true Chr02: 26259880-26266989 Phaseolus vulgaris
Phvul.002G123800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 26264990-26266989 Phaseolus vulgaris
Phvul.002G123800 2.0kb downstream 2.0kb downstream 7110 true Chr02: 26257880-26264989 Phaseolus vulgaris
Phvul.002G123800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 26257880-26259879 Phaseolus vulgaris
Phvul.002G123800 5.0kb upstream 5.0kb upstream 10110 true Chr02: 26259880-26269989 Phaseolus vulgaris
Phvul.002G123800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 26264990-26269989 Phaseolus vulgaris
Phvul.002G123800 5.0kb downstream 5.0kb downstream 10110 true Chr02: 26254880-26264989 Phaseolus vulgaris
Phvul.002G123800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 26254880-26259879 Phaseolus vulgaris
Phvul.002G123800 10.0kb upstream 10.0kb upstream 15110 true Chr02: 26259880-26274989 Phaseolus vulgaris
Phvul.002G123800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 26264990-26274989 Phaseolus vulgaris
Phvul.002G123800 10.0kb downstream 10.0kb downstream 15110 true Chr02: 26249880-26264989 Phaseolus vulgaris
Phvul.002G123800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 26249880-26259879 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299257 5265 Fabidae View MSA
124066062 5270 Rosid View MSA
123748594 5271 Pentapetalae View MSA
122794365 5272 Eudicot View MSA
122048558 5273 Angiosperm View MSA
121348267 5274 Embryophyte View MSA
123380799 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.64318 0.0 9.66147   Low
cufflinks 5.82073 0.0 20.7409    
cufflinks 9.45687 0.0 31.0868    
cufflinks 6.39918 0.0 22.7044    
cufflinks 7.70381 0.0 26.2902    
cufflinks 15.145 0.0 48.4422   High
cufflinks 4.48545 0.0 16.7973    
cufflinks 2.40857 0.0 8.74987   Low
cufflinks 6.38318 0.0 22.415    
cufflinks 3.22445 0.0 13.1652   Low
cufflinks 8.71696 0.0 29.172    

0 Strain