Gene : Phvul.001G072600 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC Genomic Order:  734
Name:  ? Phvul.001G072600 Secondary Identifier:  ? PAC:37169517
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-2724 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6054 Phaseolus vulgaris pathologic  
Pvulgaris PWY66-21 Phaseolus vulgaris pathologic  
Pvulgaris PWY66-389 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.001G072600 0.5kb upstream 0.5kb upstream 19113 true Chr01: 9698266-9717378 Phaseolus vulgaris
Phvul.001G072600 0.5kb upstream 0.5kb upstream 500 false Chr01: 9716879-9717378 Phaseolus vulgaris
Phvul.001G072600 0.5kb downstream 0.5kb downstream 19113 true Chr01: 9697766-9716878 Phaseolus vulgaris
Phvul.001G072600 0.5kb downstream 0.5kb downstream 500 false Chr01: 9697766-9698265 Phaseolus vulgaris
Phvul.001G072600 1.0kb upstream 1.0kb upstream 19613 true Chr01: 9698266-9717878 Phaseolus vulgaris
Phvul.001G072600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9716879-9717878 Phaseolus vulgaris
Phvul.001G072600 1.0kb downstream 1.0kb downstream 19613 true Chr01: 9697266-9716878 Phaseolus vulgaris
Phvul.001G072600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9697266-9698265 Phaseolus vulgaris
Phvul.001G072600 2.0kb upstream 2.0kb upstream 20613 true Chr01: 9698266-9718878 Phaseolus vulgaris
Phvul.001G072600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9716879-9718878 Phaseolus vulgaris
Phvul.001G072600 2.0kb downstream 2.0kb downstream 20613 true Chr01: 9696266-9716878 Phaseolus vulgaris
Phvul.001G072600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9696266-9698265 Phaseolus vulgaris
Phvul.001G072600 5.0kb upstream 5.0kb upstream 23613 true Chr01: 9698266-9721878 Phaseolus vulgaris
Phvul.001G072600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9716879-9721878 Phaseolus vulgaris
Phvul.001G072600 5.0kb downstream 5.0kb downstream 23613 true Chr01: 9693266-9716878 Phaseolus vulgaris
Phvul.001G072600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9693266-9698265 Phaseolus vulgaris
Phvul.001G072600 10.0kb upstream 10.0kb upstream 28613 true Chr01: 9698266-9726878 Phaseolus vulgaris
Phvul.001G072600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9716879-9726878 Phaseolus vulgaris
Phvul.001G072600 10.0kb downstream 10.0kb downstream 28613 true Chr01: 9688266-9716878 Phaseolus vulgaris
Phvul.001G072600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9688266-9698265 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302333 5265 Fabidae View MSA
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 575.616 0.0 4076.86 High High
cufflinks 54.3088 0.0 186.327 High  
cufflinks 48.2205 0.0 161.762 High  
cufflinks 44.2742 0.0 147.12 High  
cufflinks 46.3271 0.0 154.57 High  
cufflinks 27.4255 0.0 88.0385    
cufflinks 47.7086 0.0 146.701 High  
cufflinks 27.1429 0.0 86.3484    
cufflinks 57.9006 0.0 182.327 High  
cufflinks 135.785 0.0 569.713 High  
cufflinks 36.0173 0.0 117.71 High  

0 Strain