Gene : AUR62037919 C. quinoa v1.0
Defline:  (1 of 5) 5.5.1.19 - Lycopene beta-cyclase Genomic Order:  60
Name:  ? AUR62037919 Secondary Identifier:  ? PAC:36324847
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa CAROTENOID-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-5943 Chenopodium quinoa pathologic  
Cquinoa PWY-5947 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62037919 0.5kb upstream 0.5kb upstream 17236 true C_Quinoa_Scaffold_3859: 2771541-2788776 Chenopodium quinoa
AUR62037919 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3859: 2771541-2772040 Chenopodium quinoa
AUR62037919 0.5kb downstream 0.5kb downstream 17236 true C_Quinoa_Scaffold_3859: 2772041-2789276 Chenopodium quinoa
AUR62037919 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3859: 2788777-2789276 Chenopodium quinoa
AUR62037919 1.0kb upstream 1.0kb upstream 17736 true C_Quinoa_Scaffold_3859: 2771041-2788776 Chenopodium quinoa
AUR62037919 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3859: 2771041-2772040 Chenopodium quinoa
AUR62037919 1.0kb downstream 1.0kb downstream 17736 true C_Quinoa_Scaffold_3859: 2772041-2789776 Chenopodium quinoa
AUR62037919 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3859: 2788777-2789776 Chenopodium quinoa
AUR62037919 2.0kb upstream 2.0kb upstream 18736 true C_Quinoa_Scaffold_3859: 2770041-2788776 Chenopodium quinoa
AUR62037919 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3859: 2770041-2772040 Chenopodium quinoa
AUR62037919 2.0kb downstream 2.0kb downstream 18736 true C_Quinoa_Scaffold_3859: 2772041-2790776 Chenopodium quinoa
AUR62037919 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3859: 2788777-2790776 Chenopodium quinoa
AUR62037919 5.0kb upstream 5.0kb upstream 21736 true C_Quinoa_Scaffold_3859: 2767041-2788776 Chenopodium quinoa
AUR62037919 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3859: 2767041-2772040 Chenopodium quinoa
AUR62037919 5.0kb downstream 5.0kb downstream 21736 true C_Quinoa_Scaffold_3859: 2772041-2793776 Chenopodium quinoa
AUR62037919 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3859: 2788777-2793776 Chenopodium quinoa
AUR62037919 10.0kb upstream 10.0kb upstream 26736 true C_Quinoa_Scaffold_3859: 2762041-2788776 Chenopodium quinoa
AUR62037919 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3859: 2762041-2772040 Chenopodium quinoa
AUR62037919 10.0kb downstream 10.0kb downstream 26736 true C_Quinoa_Scaffold_3859: 2772041-2798776 Chenopodium quinoa
AUR62037919 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3859: 2788777-2798776 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123739346 5271 Pentapetalae View MSA
122787287 5272 Eudicot View MSA
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain