Gene : AUR62044039 C. quinoa v1.0
Defline:  (1 of 5) 5.5.1.19 - Lycopene beta-cyclase Genomic Order:  1
Name:  ? AUR62044039 Secondary Identifier:  ? PAC:36314518
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa CAROTENOID-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-5943 Chenopodium quinoa pathologic  
Cquinoa PWY-5947 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62044039 0.5kb upstream 0.5kb upstream 10685 true C_Quinoa_Scaffold_3867: 19073-29757 Chenopodium quinoa
AUR62044039 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3867: 29258-29757 Chenopodium quinoa
AUR62044039 0.5kb downstream 0.5kb downstream 10685 true C_Quinoa_Scaffold_3867: 18573-29257 Chenopodium quinoa
AUR62044039 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3867: 18573-19072 Chenopodium quinoa
AUR62044039 1.0kb upstream 1.0kb upstream 11185 true C_Quinoa_Scaffold_3867: 19073-30257 Chenopodium quinoa
AUR62044039 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3867: 29258-30257 Chenopodium quinoa
AUR62044039 1.0kb downstream 1.0kb downstream 11185 true C_Quinoa_Scaffold_3867: 18073-29257 Chenopodium quinoa
AUR62044039 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3867: 18073-19072 Chenopodium quinoa
AUR62044039 2.0kb upstream 2.0kb upstream 12185 true C_Quinoa_Scaffold_3867: 19073-31257 Chenopodium quinoa
AUR62044039 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3867: 29258-31257 Chenopodium quinoa
AUR62044039 2.0kb downstream 2.0kb downstream 12185 true C_Quinoa_Scaffold_3867: 17073-29257 Chenopodium quinoa
AUR62044039 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3867: 17073-19072 Chenopodium quinoa
AUR62044039 5.0kb upstream 5.0kb upstream 14989 true C_Quinoa_Scaffold_3867: 19073-34061 Chenopodium quinoa
AUR62044039 5.0kb upstream 5.0kb upstream 4804 false C_Quinoa_Scaffold_3867: 29258-34061 Chenopodium quinoa
AUR62044039 5.0kb downstream 5.0kb downstream 15185 true C_Quinoa_Scaffold_3867: 14073-29257 Chenopodium quinoa
AUR62044039 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3867: 14073-19072 Chenopodium quinoa
AUR62044039 10.0kb upstream 10.0kb upstream 14989 true C_Quinoa_Scaffold_3867: 19073-34061 Chenopodium quinoa
AUR62044039 10.0kb upstream 10.0kb upstream 4804 false C_Quinoa_Scaffold_3867: 29258-34061 Chenopodium quinoa
AUR62044039 10.0kb downstream 10.0kb downstream 20185 true C_Quinoa_Scaffold_3867: 9073-29257 Chenopodium quinoa
AUR62044039 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3867: 9073-19072 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123739346 5271 Pentapetalae View MSA
122787287 5272 Eudicot View MSA
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain