Gene : Solyc03g097290.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 6.1.1.7 - Alanine--tRNA ligase / Alanyl-tRNA synthetase Description:  Alanyl-tRNA synthetase (AHRD V1 **** C1EDP7_9CHLO); contains Interpro domain(s) IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal
Genomic Order:  1940 Name:  ? Solyc03g097290.2
Secondary Identifier:  ? PAC:36135467
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum TRNA-CHARGING-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g097290.2 0.5kb upstream 0.5kb upstream 14762 true SL2.50ch03: 59612536-59627297 Solanum lycopersicum
Solyc03g097290.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 59612536-59613035 Solanum lycopersicum
Solyc03g097290.2 0.5kb downstream 0.5kb downstream 14762 true SL2.50ch03: 59613036-59627797 Solanum lycopersicum
Solyc03g097290.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 59627298-59627797 Solanum lycopersicum
Solyc03g097290.2 1.0kb upstream 1.0kb upstream 15262 true SL2.50ch03: 59612036-59627297 Solanum lycopersicum
Solyc03g097290.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 59612036-59613035 Solanum lycopersicum
Solyc03g097290.2 1.0kb downstream 1.0kb downstream 15262 true SL2.50ch03: 59613036-59628297 Solanum lycopersicum
Solyc03g097290.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 59627298-59628297 Solanum lycopersicum
Solyc03g097290.2 2.0kb upstream 2.0kb upstream 16262 true SL2.50ch03: 59611036-59627297 Solanum lycopersicum
Solyc03g097290.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 59611036-59613035 Solanum lycopersicum
Solyc03g097290.2 2.0kb downstream 2.0kb downstream 16262 true SL2.50ch03: 59613036-59629297 Solanum lycopersicum
Solyc03g097290.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 59627298-59629297 Solanum lycopersicum
Solyc03g097290.2 5.0kb upstream 5.0kb upstream 19262 true SL2.50ch03: 59608036-59627297 Solanum lycopersicum
Solyc03g097290.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 59608036-59613035 Solanum lycopersicum
Solyc03g097290.2 5.0kb downstream 5.0kb downstream 19262 true SL2.50ch03: 59613036-59632297 Solanum lycopersicum
Solyc03g097290.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 59627298-59632297 Solanum lycopersicum
Solyc03g097290.2 10.0kb upstream 10.0kb upstream 24262 true SL2.50ch03: 59603036-59627297 Solanum lycopersicum
Solyc03g097290.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 59603036-59613035 Solanum lycopersicum
Solyc03g097290.2 10.0kb downstream 10.0kb downstream 24262 true SL2.50ch03: 59613036-59637297 Solanum lycopersicum
Solyc03g097290.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 59627298-59637297 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473791 5263 Asterids View MSA
123740226 5271 Pentapetalae View MSA
122791486 5272 Eudicot View MSA
122047019 5273 Angiosperm View MSA
121346985 5274 Embryophyte View MSA
123424131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain